DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15042 and Tdrd5

DIOPT Version :9

Sequence 1:NP_573308.1 Gene:CG15042 / 32844 FlyBaseID:FBgn0030937 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_006250099.1 Gene:Tdrd5 / 289129 RGDID:1307078 Length:1046 Species:Rattus norvegicus


Alignment Length:493 Identity:108/493 - (21%)
Similarity:175/493 - (35%) Gaps:137/493 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FNLMKTE-SIPSCLLQPIRAVPKCVNSKEILSSLARNPRKSRLYPPHGGHMRSVVGTFYKITDQI 69
            |.:.||. |.|...::|    ||.|.|.|.: .:......|||  .|...:..:..||..:..||
  Rat   228 FPVTKTRFSQPISNMEP----PKQVLSMEKI-PMFNTVEASRL--SHTEKLNQLESTFKSVIAQI 285

  Fly    70 GEIAIGTKLTGTV--LLESLPVFYVTINGPG---SKLLKCLAMGQVQLQELEQLPDYGEIFAFYD 129
            |.       .|||  .|:....|.|:....|   ||||     |:.:|...|||..  :...|.:
  Rat   286 GP-------GGTVDPDLKHKIKFVVSKFPQGLFISKLL-----GEFELVFKEQLSP--KQLGFLN 336

  Fly   130 KAE-----NRISRIAIN-------------APVHPMG-------YCAYMIDAAKYTNMSGMERIF 169
            ..|     :.|.|:..:             .|:.|.|       .|....|.....|      .:
  Rat   337 VTELVGALSDILRVEFSEEKQDLLVFDADLRPLLPAGPLSSVRNSCLVQPDKRIEAN------AW 395

  Fly   170 ALPDDLKKLPALTIK-----CRLVN--VAQMHIFITQNVRLRVLGSNGLELLVALIRNRTNIRKI 227
            |.......|..:.:|     |.|.|  .|:...:...|:.::     .|:|.|...:::.:: .:
  Rat   396 ASSPSRNSLSTVAVKKTTWDCPLKNHKEAEQKAYKKPNLVVK-----PLQLQVETNKSQLSL-SM 454

  Fly   228 PSAQLPPISGDEYGNMDANDREVAKSFARYRPKRRERGSIVRVHVTRIVSHAEFYARF--ADGPT 290
            .:..:||            |...||...|..|  .:..::|.|.|..|:|.::||.|.  .|...
  Rat   455 ANHDIPP------------DAVRAKKLCRLPP--LDTSTLVGVFVEYIISPSQFYVRIYSRDSSE 505

  Fly   291 VPTWSKSVMKRGTGDFRVWDIVLAP--------------------YQGRYHR---AKIVDIFRCR 332
            :.......|:|...:..|.|..:.|                    |:...||   .|.|::|   
  Rat   506 LLEDMMIEMRRCYSNQLVSDRYVMPEYFIQPGHLCCVRISEDKWWYRVIIHRILGKKEVEVF--- 567

  Fly   333 YRVYFLDFGITEYTSKKNLTF---CYELEKAQH---NLAF---------RFEILGTRRQCPI-PY 381
                :.|||......|.:|.|   ||....||.   :||:         ...||..::.|.: |.
  Rat   568 ----YPDFGNIGTVQKSSLRFLKCCYTKLPAQAIPCSLAWVRPAEEHWTSKAILHFQKLCGLKPL 628

  Fly   382 INI----LEGIKHLEHTVLRSDINVRIHNILKDGGYVI 415
            :.:    ::||.::......|:.:|..|::|:..|:.|
  Rat   629 VGVVDEYIDGILNIFLCDTSSNEDVYFHHVLRTEGHAI 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15042NP_573308.1 TUDOR 310..351 CDD:119391 12/63 (19%)
Tdrd5XP_006250099.1 LOTUS_1_TDRD5 4..98 CDD:193599
LOTUS_2_TDRD5 127..196 CDD:193589
LOTUS_3_TDRD5 292..365 CDD:193590 17/79 (22%)
TUDOR 483..602 CDD:278965 29/125 (23%)
TUDOR 537..583 CDD:119391 10/52 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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