DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15042 and tdrd6

DIOPT Version :9

Sequence 1:NP_573308.1 Gene:CG15042 / 32844 FlyBaseID:FBgn0030937 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_031758870.1 Gene:tdrd6 / 105948404 XenbaseID:XB-GENE-5969988 Length:2499 Species:Xenopus tropicalis


Alignment Length:421 Identity:87/421 - (20%)
Similarity:157/421 - (37%) Gaps:114/421 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKEILSSLARNPRKSRLYPPHGGHMRSVVGTFYKITDQI-----------GEIAIGTKLTGTVLL 84
            |:|.:.||.:.|.:: .|.|........:.|||.:..:.           ||.|  ||.  :.::
 Frog   467 SQEDVKSLPQTPPEA-FYVPTVPVAELNISTFYDVLVEFVADPSNFWIRTGENA--TKY--SEMM 526

  Fly    85 ESLPVFYVTINGPGSKLLKCLAMGQVQLQELEQLPDYGEIFA--FYDKAENRISRIAINAPVHPM 147
            |.:...|       ||..|        |..:...|..|::..  |.|....|...:||...:..:
 Frog   527 EQIAALY-------SKASK--------LDGIMTTPMAGQLCCTKFKDDRFYRAEIVAIKGKMVEV 576

  Fly   148 GYCAYMIDAAKYTNMSGMERIFALPDDLKKLPALTIKCRLVN-------------VAQMHIFITQ 199
                |.||... |.:.....:..||.:|.::|.|.|.|.:.:             :|.....:.:
 Frog   577 ----YFIDHGN-TELVDWYNVKKLPAELGEMPGLAIYCSVADTYPLGDSWSPEAILAFKMAVVDK 636

  Fly   200 NVRLRVLGSNGLELLVALIRN----RTNIRKIPSA-------QLPPISGDEYGNMDANDREVAKS 253
            .:.:.||.....:.::.::.|    :.::.||.||       ::.|:: ...|.....||::.:.
 Frog   637 RLVIYVLSKEHNKYIIEVLDNSRIEQRSVGKILSAVGHAKYEEVEPVA-QHPGTTSDIDRKMQQQ 700

  Fly   254 FARYRP------KRRERGSIVRVHVTRIVSHAEFYARFAD-GPTVPT-----------WSKSVMK 300
            |:.:..      |.|::..:..|...:...::.|..:|.: |.|:..           |.::.:.
 Frog   701 FSGHLNKDISLLKARQKEVVCSVQENKSEPYSPFEDQFFEPGTTIEVVVSCIINPSLFWCQNALH 765

  Fly   301 RGTGD---FRVWDIVL---APYQ-------------GRYHRAKIVDIFRC------RYRVYFLDF 340
            ....:   .::.||.|   ..|:             ||::||.||:....      ...|.|:|:
 Frog   766 SAKLEKLMAKIQDICLNAGCSYERGACACLAKSSCDGRWYRAFIVNEMPAGKASSDHVEVLFVDY 830

  Fly   341 GITEYTSKKNLTFCYELE----KAQHNLAFR 367
            ||.|..|.|:|. |.|.|    |||   ||:
 Frog   831 GIRETVSLKDLR-CMESELFGLKAQ---AFK 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15042NP_573308.1 TUDOR 310..351 CDD:119391 18/62 (29%)
tdrd6XP_031758870.1 Tudor_SF 24..153 CDD:413384
Tudor_TDRD6_rpt2 258..389 CDD:410492
Tudor_SF 497..630 CDD:413384 32/156 (21%)
Tudor_SF 734..863 CDD:413384 32/128 (25%)
Tudor_SF 950..1073 CDD:413384
Tudor_SF 1371..1483 CDD:413384
Tudor_SF 1578..1717 CDD:413384
MDN1 <1950..2492 CDD:227596
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22948
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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