DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisRS and GCN2

DIOPT Version :10

Sequence 1:NP_573305.2 Gene:HisRS / 32841 FlyBaseID:FBgn0027087 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001190135.1 Gene:GCN2 / 825110 AraportID:AT3G59410 Length:1265 Species:Arabidopsis thaliana


Alignment Length:602 Identity:154/602 - (25%)
Similarity:264/602 - (43%) Gaps:113/602 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 REQILEQIKVQGDLVRQLKAAKESKEKT-------APSGGGRVSSS-----GVPAQRQQQ--QQP 55
            |..||..:|::|:|  .||...|..|:.       :||...|.|::     ..|.:.:.:  ...
plant   704 RHVILTNLKLKGEL--PLKWVNEFPEQASLLRRLMSPSPSDRPSATELLKHAFPPRMESELLDNI 766

  Fly    56 QKQQQAQVQQQQHEQLHQI--DEEVARLLALKATLGGDAAPTNQKFTLKTPKGTRDYGPQQMTLR 118
            .:..|.......::::..:  ||||..:.:.:::          :..|........|......||
plant   767 LRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSS----------RSRLCADDSYIQYTEINTELR 821

  Fly   119 QGVLDKIVQVFKRHGGEAI---------DTPVFELKEVLTGKYGEDSKLIYDLKDQGGEILSMRY 174
            ..|::...:||::|..:.:         |.|.|..|.|         ||:    ..||::|.:.|
plant   822 DYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTV---------KLL----TNGGDMLELCY 873

  Fly   175 DLTVPLARYLAMNKISSIKRYHIAKVYRR------DNPAMTKGRYREFYQCDFDI-AGTYDPMLP 232
            :|.:|...::::|:.||.|||.|:.||||      .||.:         |.|||| .||..  |.
plant   874 ELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCL---------QADFDIVGGTLS--LT 927

  Fly   233 DAECVKIVSEILDTLDI---GDYVIKLNHRQLLDGMFQACGVPADSFRTICSAVDKLD------- 287
            :||.:|::.:|  |..|   |...|.|||..|||.::...|:.|:..|.:...:..:.       
plant   928 EAEVLKVIVDI--TTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQSS 990

  Fly   288 --KSPWADVRKEMVDEKGLDEAAADRIGEYV-RLSGGAELVEQLLANEK--LKAVPNAVKGLEGM 347
              |..|..:|::::.|..|.||..:|:.... |..|.|   :|.|...:  |:|.....|.|:.:
plant   991 ERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDA---DQALPRLRGALRADRPTRKALDEL 1052

  Fly   348 KQLLKYCSIFGLDKRVSFDLSLARGLDYYTGVIYEGVLKGESATVASPAKTSQQNGEQANEPATV 412
            ..||.|..::.:::.|..|:.:.....|:..:.::..|            |.:.:...:|:... 
plant  1053 SNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFL------------TKENSSGTSNDGVL- 1104

  Fly   413 GSVAGGGRYDNLV-GMFDPRGKA-VP-CVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYVAS- 473
              :|.|||||.|| .:.|...|. :| .||||:.:|.||..|.........::.||   |.|.| 
plant  1105 --LAVGGRYDWLVQEVCDREHKMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTS---VLVCSR 1164

  Fly   474 AHKGLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQG---LVK 535
            ...||..||::::..||:..:|||.....:|.|..|.::..||:|..:|::.::.:||.   .||
plant  1165 GGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQIEFVK 1229

  Fly   536 LREVTTREETNVKLEDL 552
            :|.:..::|..|..|:|
plant  1230 VRHLELKKEKVVGREEL 1246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisRSNP_573305.2 S15_NS1_EPRS_RNA-bind 6..92 CDD:469733 19/101 (19%)
PLN02972 <102..559 CDD:215525 133/489 (27%)
GCN2NP_001190135.1 RWD_RNF25 67..170 CDD:467654
STKc_EIF2AK4_GCN2_rpt2 442..753 CDD:270948 14/50 (28%)
PLN02972 <820..1250 CDD:215525 132/474 (28%)
Blue background indicates that the domain is not in the aligned region.

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