DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisRS and HRS1

DIOPT Version :9

Sequence 1:NP_573305.2 Gene:HisRS / 32841 FlyBaseID:FBgn0027087 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_190196.1 Gene:HRS1 / 823753 AraportID:AT3G46100 Length:486 Species:Arabidopsis thaliana


Alignment Length:498 Identity:139/498 - (27%)
Similarity:226/498 - (45%) Gaps:75/498 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 RLLALKATLGGDA----APT------NQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGG 134
            ||:...|..||.:    ||.      ::|..:..||||||:.|:.|.||..:.:...:|.:.:|.
plant    38 RLICAAANGGGRSGSIVAPLVTEEDFHKKIDVNPPKGTRDFPPEDMRLRNWLFNHFKEVSRLYGY 102

  Fly   135 EAIDTPVFELKEVLTGKYGEDSK-LIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSI----KR 194
            |.:|.||.|.:.:...|.||:.: .:|..:|:|...:::|.:||..||| |.:.|..|:    |.
plant   103 EEVDYPVLETEALFIRKAGEEIRDQLYCFEDRGNRRVALRPELTPSLAR-LVIQKGKSVSLPLKW 166

  Fly   195 YHIAKVYRRDNPAMTKGRYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDTLDI--GDYVIKLN 257
            :.|.:.:|.:.  ||:||.||.||.:.||.|. ..:..:||.:..:......:.|  .|...|::
plant   167 FAIGQCWRYER--MTRGRRREHYQWNMDIIGV-PQVTAEAELISSIVTFFKRIGITASDVGFKVS 228

  Fly   258 HRQLLDGMFQACGVPADSFRTICSAVDKLDKSPWADVRKEMVDEKGLDEAAADRIGEYVRLSGGA 322
            .|::|..:.:..|||.|.|..:|..:||::|.|..:::||: ...|:.|.|              
plant   229 SRKVLQELLKKYGVPEDLFGRVCIIIDKIEKIPIDEIKKEL-GFTGISEDA-------------- 278

  Fly   323 ELVEQLLANEKLKA-------VPNAVKGLEGMKQLLKYCSIFGLDKRVSFDLSLARGLDYYTGVI 380
              :||||....:|:       :..|.:.:..:|||......||..:.:.||.|:.|||.||||::
plant   279 --IEQLLQVLSVKSLDDLEDIIGGAGEAIADLKQLFSLAEKFGYSEWIQFDASVVRGLAYYTGIV 341

  Fly   381 YEGV-LKGESATVASPAKTSQQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKAVPCVGVSIGV 444
            :||. .||:                       :.::.||||||.|:..:.  |...|..|...|.
plant   342 FEGFDRKGK-----------------------LRAICGGGRYDRLLSTYG--GDDFPACGFGFGD 381

  Fly   445 ERIFSVLEARAAASGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQ 509
            ..|..:|:.:.....|   ..:||..|.:..|.|......|...|.|.|...:...:..|...|.
plant   382 AVIVELLKEKDLLPEL---GQEVENIVCALDKDLQGAAATVATALRDKGQTVDLVLESKPLKWVF 443

  Fly   510 LQHCEEHQIPLVVVLGDAELAQGLVKLREVTTREETNVKLEDL 552
            .:....:...||:| |..|...|.|.::.:::.|:..|||.||
plant   444 KRAARVNARRLVLV-GKTEWEDGSVSVKVLSSGEQFQVKLSDL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisRSNP_573305.2 S15_NS1_EPRS_RNA-bind 6..92 CDD:294248 5/11 (45%)
HisS 98..561 CDD:223202 132/470 (28%)
HisRS-like_core 114..452 CDD:238396 98/352 (28%)
HisRS_anticodon 467..557 CDD:238436 24/86 (28%)
HRS1NP_190196.1 PLN02530 2..486 CDD:178145 139/498 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 157 1.000 Inparanoid score I1662
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1065556at2759
OrthoFinder 1 1.000 - - FOG0001634
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100351
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.730

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