DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment HisRS and hars

DIOPT Version :10

Sequence 1:NP_573305.2 Gene:HisRS / 32841 FlyBaseID:FBgn0027087 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001289185.1 Gene:hars / 447847 ZFINID:ZDB-GENE-040912-152 Length:520 Species:Danio rerio


Alignment Length:492 Identity:312/492 - (63%)
Similarity:376/492 - (76%) Gaps:11/492 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 LHQIDEEVARLLALKATLGGDAAPTNQKFTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGE 135
            :.||||||||||.|||.||||..  ...|.|||.||||||.|:||.:|:.|.:.|:..|||||.|
Zfish    35 ISQIDEEVARLLQLKAQLGGDEG--KHVFVLKTAKGTRDYNPKQMAIREKVFNIIINCFKRHGAE 97

  Fly   136 AIDTPVFELKEVLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIAKV 200
            .||:|||||||.|||||||||||||||||||||:||:|||||||.|||||||||::|||||||||
Zfish    98 TIDSPVFELKETLTGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKV 162

  Fly   201 YRRDNPAMTKGRYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDTLDIGDYVIKLNHRQLLDGM 265
            |||||||||:|||||||||||||||.||.|:|||||:|:|.|||..||:||:.||:|.|::||||
Zfish   163 YRRDNPAMTRGRYREFYQCDFDIAGQYDAMIPDAECLKLVYEILSELDLGDFRIKVNDRRILDGM 227

  Fly   266 FQACGVPADSFRTICSAVDKLDKSPWADVRKEMVDEKGLDEAAADRIGEYVRLSGGAELVEQLLA 330
            |..||||.:.||||||.||||||..|.:|:||||:||||.|..||||.:||.:.||.:|.|:||.
Zfish   228 FAICGVPDEKFRTICSTVDKLDKLAWEEVKKEMVNEKGLSEEVADRIRDYVSMQGGKDLAERLLQ 292

  Fly   331 NEKLKAVPNAVKGLEGMKQLLKYCSIFGLDKRVSFDLSLARGLDYYTGVIYEGVLKGESATVASP 395
            :.||.....|..|:..||.|..|..:|.:..:|.||||||||||||||||||.:|     |.|:|
Zfish   293 DPKLSQSKQACAGITDMKLLFSYLELFQITDKVVFDLSLARGLDYYTGVIYEAIL-----TQANP 352

  Fly   396 AKTS---QQNGEQANEPATVGSVAGGGRYDNLVGMFDPRGKAVPCVGVSIGVERIFSVLEARAAA 457
            |..|   :|||.: :...:|||||||||||.|||||||:|:.|||||||||:||:||::|.:|..
Zfish   353 APASTPAEQNGAE-DAGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERVFSIMEQKAEL 416

  Fly   458 SGLKLRTSDVEVYVASAHKGLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVV 522
            |..|:||::.:|.||||.|.|.|:|||:...||:||:|||..||.|||||.||||||:..||||.
Zfish   417 SSEKVRTTETQVLVASAQKNLLEERLKLTAELWNAGIKAEVLYKKNPKLLSQLQHCEDTGIPLVA 481

  Fly   523 VLGDAELAQGLVKLREVTTREETNVKLEDLAAEIRRR 559
            :||:.||..|:||||.|.:|||.:|...:|..|:::|
Zfish   482 ILGEQELKDGVVKLRNVASREEVDVPRAELVDEVKKR 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisRSNP_573305.2 S15_NS1_EPRS_RNA-bind 6..92 CDD:469733 16/20 (80%)
PLN02972 <102..559 CDD:215525 292/459 (64%)
harsNP_001289185.1 S15_NS1_EPRS_RNA-bind <37..56 CDD:469733 16/18 (89%)
PLN02972 <64..518 CDD:215525 292/459 (64%)

Return to query results.
Submit another query.