DRSC/TRiP Functional Genomics Resources

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Protein Alignment HisRS and Hars2

DIOPT Version :9

Sequence 1:NP_573305.2 Gene:HisRS / 32841 FlyBaseID:FBgn0027087 Length:564 Species:Drosophila melanogaster
Sequence 2:NP_001014034.2 Gene:Hars2 / 307491 RGDID:1308426 Length:507 Species:Rattus norvegicus


Alignment Length:482 Identity:266/482 - (55%)
Similarity:347/482 - (71%) Gaps:16/482 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 KATLGGD-AAPTNQK--FTLKTPKGTRDYGPQQMTLRQGVLDKIVQVFKRHGGEAIDTPVFELKE 146
            ||.|..: ..|..||  |.:|.||||||..||||.:|:.:||||:..|||||.:.:|||.|||||
  Rat    39 KAVLTSEQLKPHQQKPNFIIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKE 103

  Fly   147 VLTGKYGEDSKLIYDLKDQGGEILSMRYDLTVPLARYLAMNKISSIKRYHIAKVYRRDNPAMTKG 211
            :||.||.::..|:|||:|||||:||:|||||||.||||||||:..:|||.:.||:||::||:.:|
  Rat   104 MLTEKYEDNFGLMYDLEDQGGELLSLRYDLTVPFARYLAMNKLKRMKRYQVGKVWRRESPAIVQG 168

  Fly   212 RYREFYQCDFDIAGTYDPMLPDAECVKIVSEILDTLDIGDYVIKLNHRQLLDGMFQACGVPADSF 276
            |||||.||||||||.:|||:|||||::|:.|||..|.:||::||:|.|:::||||..||||...|
  Rat   169 RYREFCQCDFDIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGMFAVCGVPESKF 233

  Fly   277 RTICSAVDKLDKSPWADVRKEMVDEKGLDEAAADRIGEYVRLSGGAELVEQLLANEKLKAVPNAV 341
            |||||::|||||..|.|||.|||..|||....|||||:||:..||..|||:|..:.:|.....|:
  Rat   234 RTICSSMDKLDKMSWEDVRLEMVAGKGLAPEVADRIGDYVQCHGGISLVEELFKDPRLSQSQLAL 298

  Fly   342 KGLEGMKQLLKYCSIFGLDKRVSFDLSLARGLDYYTGVIYEGVLKGESATVASPAKTSQQNGEQA 406
            :||..:|.|.:|..:||:..::|.|||||||||||||||||.||      :.|||:..:      
  Rat   299 QGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVL------LESPAQAGK------ 351

  Fly   407 NEPATVGSVAGGGRYDNLVGMFDPRGKAVPCVGVSIGVERIFSVLEARAAASGLKLRTSDVEVYV 471
             |...|||||.|||||.||..|||:|.:|||||:||||||||.::|.:...|..|:||::.:|:|
  Rat   352 -ETLNVGSVAAGGRYDRLVAQFDPKGHSVPCVGLSIGVERIFYLVEQKMKISCEKVRTTETQVFV 415

  Fly   472 ASAHKGLHEQRLKVLNLLWDAGVKAEHSYKLNPKLLVQLQHCEEHQIPLVVVLGDAELAQGLVKL 536
            |:..|...::|||::..|||||:|||..||.|||||.||.:||:..|||:|::|:.|..:|:|||
  Rat   416 ATPQKNFLQERLKIIAQLWDAGIKAEMLYKNNPKLLTQLHYCEKEDIPLMVIIGEQEQNEGVVKL 480

  Fly   537 REVTTREETNVKLEDLAAEIRRRQQAS 563
            |.|.:|||..|..|.|.|||::|...|
  Rat   481 RSVASREEVTVNRESLVAEIQKRLSES 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HisRSNP_573305.2 S15_NS1_EPRS_RNA-bind 6..92 CDD:294248 3/7 (43%)
HisS 98..561 CDD:223202 260/464 (56%)
HisRS-like_core 114..452 CDD:238396 196/337 (58%)
HisRS_anticodon 467..557 CDD:238436 46/89 (52%)
Hars2NP_001014034.2 HisS 58..505 CDD:223202 258/459 (56%)
HisRS-like_core 71..396 CDD:238396 196/337 (58%)
HisRS_anticodon 410..501 CDD:238436 46/90 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352238
Domainoid 1 1.000 413 1.000 Domainoid score I653
eggNOG 1 0.900 - - E1_COG0124
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 631 1.000 Inparanoid score I808
OMA 1 1.010 - - QHG55859
OrthoDB 1 1.010 - - D1065556at2759
OrthoFinder 1 1.000 - - FOG0001634
OrthoInspector 1 1.000 - - otm45564
orthoMCL 1 0.900 - - OOG6_100351
Panther 1 1.100 - - O PTHR11476
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1525
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.770

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