DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6470 and CG8478

DIOPT Version :10

Sequence 1:NP_573304.1 Gene:CG6470 / 32840 FlyBaseID:FBgn0030933 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001163576.1 Gene:CG8478 / 41194 FlyBaseID:FBgn0037746 Length:576 Species:Drosophila melanogaster


Alignment Length:335 Identity:83/335 - (24%)
Similarity:133/335 - (39%) Gaps:45/335 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VKRAKRTGCSRIQPQEFVEAQVENARRAVERKLIYLSESNRASASTRAAKRSTAGAGGGAGREGS 74
            :......|.|.:......|.:|.:....|......::::.:.||.  :.|.:|:.....||::..
  Fly   209 ITEVSNEGVSMLVSPAGAEKEVAHVNEVVNEVSELIAKALKISAD--SVKPATSKLKVEAGKKRQ 271

  Fly    75 SMAGHAHGERRRRSKRSLLHAPAQEE---TDEEESSPLEKTNNYDNRRRSSCNLLLSPRRNGLTP 136
            ||:....|....|.:||.|.....|.   :.::..|.:.||......|:.|....:|..|....|
  Fly   272 SMSSTYSGAALPRPRRSYLPTTTAETRTYSFKQRMSVVVKTTLNSPARKRSVGGGVSLSRRSCLP 336

  Fly   137 RNYEAEAEAAEMEAIMAAQQASNGTTKPDHDEGDGGEYQGGPFGRLQLKPLGSYATDQQLPS--Y 199
            .:...::...:..|:.:.:......:||                        :..:.:.:|.  :
  Fly   337 VSKLTKSSIRKSLAVTSVRSPEKIASKP------------------------AKTSTKSIPEKVF 377

  Fly   200 SCGVCGAKFHIRSLLGAHRHTHDD-DFKVRFRARRPRESRTTLTTVHLCKYCDRSFDLERTLHIH 263
            ||..|...|.::|||..|...||. |.......|..........:.:.||:||::|.|||.||||
  Fly   378 SCKNCSTTFRVKSLLDVHMRMHDPVDNGANTLKRLNSNPVAAGVSKNRCKFCDKNFALERALHIH 442

  Fly   264 LLSYCKKIPPQQRRKLAFTELAHEKKAPLPNF-------------QRAQQPVHHQGNSATNQQDQ 315
            |:..|.||||.::|||.||||.|||||.||..             |:.||.:......|.:|..|
  Fly   443 LMQNCDKIPPSEKRKLEFTELNHEKKAQLPKIGGTSGINHPMTMPQKPQQRISTIPKLAPSQGTQ 507

  Fly   316 MTQQEKLQKI 325
            ......::||
  Fly   508 SMAPPSVKKI 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6470NP_573304.1 SUF4-like 245..>263 CDD:411020 10/17 (59%)
CG8478NP_001163576.1 zf-C2H2 377..399 CDD:395048 8/21 (38%)
C2H2 Zn finger 379..399 CDD:275368 7/19 (37%)
C2H2 Zn finger 426..444 CDD:275368 12/17 (71%)

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