DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and Wnt4

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_445854.1 Gene:Wnt4 / 84426 RGDID:621348 Length:351 Species:Rattus norvegicus


Alignment Length:463 Identity:137/463 - (29%)
Similarity:198/463 - (42%) Gaps:160/463 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....||...|.:.|.::..||.::..||:.||:|||:||:||||||||.:...|||.:.:....
  Rat    43 CEKLKGLIQRQVQMCKRNLEVMDSVRHGAQLAIEECQYQFRNRRWNCSTLDSLPVFGKVVTQGTR 107

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSR---GSRPKQLHDDWKWGGCGDNLEFAYKFATD 674
            |.||::|:::|.|...:.|||..|.|..|.|.|   |..|:    .::|.||.||:.:...|:..
  Rat   108 EAAFVYAISSAGVAFAVTRACSSGDLEKCGCDRTVHGVSPQ----GFQWSGCSDNIAYGVAFSQS 168

  Fly   675 FIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEA 739
            |:|.||                                                           
  Rat   169 FVDVRE----------------------------------------------------------- 174

  Fly   740 ENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKN 804
                                                                             
  Rat   175 ----------------------------------------------------------------- 174

  Fly   805 QRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSG 869
                                      ||.....:|:|||||||||||:|::...|:.||||||||
  Rat   175 --------------------------RSKGASSSRALMNLHNNEAGRKAILTHMRVECKCHGVSG 213

  Fly   870 SCSLITCWQQLSSIREIGDYLREKYEGATKVKINKRG---RLQIKDLQFKVPTAHDLIYLDESPD 931
            ||.:.|||:.:...|::|..|:||::|||:|:..:.|   .|..::.|||..|..||:||:.|||
  Rat   214 SCEVKTCWRAVPPFRQVGHALKEKFDGATEVEPRRVGSSRALVPRNAQFKPHTDEDLVYLEPSPD 278

  Fly   932 WCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTK 996
            :|.........||.||.|:|.|..::.|.:||||||::|.::.:.|||.|:|||||.|||..|.:
  Rat   279 FCEQDMRSGVLGTRGRTCNKTSKAIDGCELLCCGRGFHTAHVELAERCGCRFHWCCFVKCRQCQR 343

  Fly   997 VLEEHTCK 1004
            ::|.|||:
  Rat   344 LVEMHTCR 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 134/455 (29%)
Wnt4NP_445854.1 wnt 49..351 CDD:278536 134/455 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345780
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H22529
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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