DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt5 and wnt5a

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001073303.1 Gene:wnt5a / 568191 ZFINID:ZDB-GENE-060328-3 Length:374 Species:Danio rerio


Alignment Length:457 Identity:156/457 - (34%)
Similarity:215/457 - (47%) Gaps:145/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....|||..|||.|..:...|..|..||:..|:|||.||::|||||||.::.||.|.:..:.:.
Zfish    63 CSQLSGLSKGQKKLCQLYQDHMQYIGEGAKTGIRECQHQFRHRRWNCSTVDNSTVLGRVMHIGSR 127

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGDNLEFAYKFATDFID 677
            |.||..|::||.|...::||||:|.|:||.|||.||||.|..||.||||||||.:.|:|:.:|:|
Zfish   128 ESAFAFAISAAGVLHAVSRACREGALSSCGCSRASRPKDLPRDWLWGGCGDNLNYGYRFSREFVD 192

  Fly   678 SREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENS 742
            :||:|..                                                          
Zfish   193 AREREKT---------------------------------------------------------- 199

  Fly   743 HILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRA 807
                                                           |.||..:           
Zfish   200 -----------------------------------------------FSKGSAE----------- 206

  Fly   808 AADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCS 872
                                         .||.:|||||||||||.|...|.::|||||||||||
Zfish   207 -----------------------------SARQMMNLHNNEAGRRIVSDLADVSCKCHGVSGSCS 242

  Fly   873 LITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDLQFKVPTAHDLIYLDESPDWCRNSY 937
            |.|||.||:..|::||.|:|||:.|..:::|.||:|.....:|..|:..||:||..|||:|..:.
Zfish   243 LKTCWLQLADFRKVGDVLKEKYDSAAAMRMNGRGKLVQMHSKFSPPSGQDLLYLQPSPDYCIRNS 307

  Fly   938 ALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHT 1002
            :....||.||:|:|.|.|::.||::||||||:.....:.|||:|||||||.|:|:.|:.:::::.
Zfish   308 SSGSLGTQGRLCNKTSEGMDGCALMCCGRGYDQYKAELVERCHCKFHWCCYVRCKRCSSIVDQYV 372

  Fly  1003 CK 1004
            ||
Zfish   373 CK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 152/449 (34%)
wnt5aNP_001073303.1 wnt 69..374 CDD:278536 152/449 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586722
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.