DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and LOC568110

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_696514.2 Gene:LOC568110 / 568110 -ID:- Length:350 Species:Danio rerio


Alignment Length:469 Identity:135/469 - (28%)
Similarity:185/469 - (39%) Gaps:168/469 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....||:..|:..|......:..|..||:..|.|||||||:.|||||...:.||||....:.:.
Zfish    38 CNKIPGLAPRQRIICQSRPDAIIVIGEGAQMGINECQFQFKHGRWNCSALGERTVFGKELKVGSK 102

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDD-WKWGGCGDNLEFAYKFATDFI 676
            |.||::|:.||.|...|..||..|.|:.|||.:..:....||: ||||||..::.:...|:..|:
Zfish   103 EAAFMYAIIAAGVAHAITSACTRGNLSECSCDKDKQGFYAHDNGWKWGGCSADVRYGLGFSKVFM 167

  Fly   677 DSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAEN 741
            |::|                                                             
Zfish   168 DAKE------------------------------------------------------------- 171

  Fly   742 SHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQR 806
                                                                             
Zfish   172 ----------------------------------------------------------------- 171

  Fly   807 AAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSC 871
                        ||.|               ||:||||||||.||:.:.:..|:.||||||||||
Zfish   172 ------------IKHS---------------ARTLMNLHNNEVGRKVLERNMRLECKCHGVSGSC 209

  Fly   872 SLITCWQQLSSIREIGDYLREKYEGATKVKINKRGR------LQI-KDLQFKVPTAHDLIYLDES 929
            :..|||..|...||:|..|::||..|..|:..|..|      |:| |...::.|...||:|:::|
Zfish   210 ATRTCWTTLPKFRELGYILKDKYTSAIHVEPVKATRHKRPTFLKIKKPYSYRKPMDTDLVYIEKS 274

  Fly   930 PDWCRNSYALHWPGTHGRVCHK----NSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVK 990
            |::|.........||.||||:|    :.:|   |.::||||||||.......:|||||.|||.||
Zfish   275 PNYCEADLRSGSIGTQGRVCNKTLMHHPNG---CDLMCCGRGYNTHQYSRVWQCNCKFFWCCYVK 336

  Fly   991 CEVCTKVLEEHTCK 1004
            |..|::..|.:|||
Zfish   337 CNTCSERTEVYTCK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 131/461 (28%)
LOC568110XP_696514.2 wnt 44..350 CDD:278536 131/461 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586736
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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