DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and wnt5b

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_012814299.1 Gene:wnt5b / 448452 XenbaseID:XB-GENE-480396 Length:375 Species:Xenopus tropicalis


Alignment Length:457 Identity:164/457 - (35%)
Similarity:227/457 - (49%) Gaps:145/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....|||..|:|.|..:...|..|..||:..|:|||.|||:|||||||.::.:|||.:..:.:.
 Frog    64 CSQLTGLSPGQRKLCQLYQDHMVYIGEGAKTGIKECQHQFKHRRWNCSTVDNNSVFGRVMQIGSR 128

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGDNLEFAYKFATDFID 677
            |.||.:|::||.|.:.|:||||:|:|::|.|||..|||.|..||.|||||||:|:.|:||.:|:|
 Frog   129 EAAFTYAISAAGVVNAISRACREGELSTCGCSRTPRPKDLPRDWLWGGCGDNVEYGYRFAKEFVD 193

  Fly   678 SREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENS 742
            :||:|.|                                                          
 Frog   194 AREREKN---------------------------------------------------------- 200

  Fly   743 HILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRA 807
                                                           |.||.::           
 Frog   201 -----------------------------------------------FPKGSEE----------- 207

  Fly   808 AADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCS 872
                                         :|||||||.|||||||||.|.|.:.|||||||||||
 Frog   208 -----------------------------QARSLMNLQNNEAGRRAVYKLADVACKCHGVSGSCS 243

  Fly   873 LITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDLQFKVPTAHDLIYLDESPDWCRNSY 937
            |.|||.||:..|::|:|::|||:.|..:::|||.:|:..:.:|..|||.||:|||.|||:|..:.
 Frog   244 LKTCWLQLADFRKVGEYIKEKYDSAASMRLNKRNKLEQVNQRFNPPTAEDLVYLDPSPDYCLYNE 308

  Fly   938 ALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHT 1002
            .....|||||.|:|.|.|::.|.::||||||:....:..|||:|||||||.|||:.||::::::.
 Frog   309 TTGSLGTHGRQCNKTSEGMDGCELMCCGRGYDQFKTVQVERCHCKFHWCCFVKCKKCTEIVDQYV 373

  Fly  1003 CK 1004
            ||
 Frog   374 CK 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 160/449 (36%)
wnt5bXP_012814299.1 Wnt 64..375 CDD:393294 162/455 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003382
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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