DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt5 and Wnt10

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_609109.3 Gene:Wnt10 / 34011 FlyBaseID:FBgn0031903 Length:483 Species:Drosophila melanogaster


Alignment Length:670 Identity:147/670 - (21%)
Similarity:207/670 - (30%) Gaps:310/670 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly   436 SFKVSSEGSDGELLSRVERSQPSISSSSSSSSSSSRKIMPDYIKVSMENNTSVTDYFK-----HD 495
            :::.:|:|.:.:.|.:.::.|....|||||:|||              ||...|....     |.
  Fly     3 AWRATSKGHEQQQLPQQQKQQQEAGSSSSSNSSS--------------NNLVATPATSRHCNLHL 53

  Fly   496 VVMTSADVASDREFLIKNMEEHGGAGSANSHHNDTTPTADAYSETIDLNPNNCYSAIGLSNSQKK 560
            :||..  :|....:|      :|            .|...|          .|.|..||:..|.:
  Fly    54 IVMII--LACCTRWL------YG------------LPDGRA----------TCRSVPGLTKDQVE 88

  Fly   561 QCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP---EMAFIHALAA 622
            .|.|.:.|..|...|...||:|||.||:..|||||:.:.::.....:||...   |.||..|::|
  Fly    89 LCYKASDVTAAALEGLDMAIRECQIQFQWHRWNCSSLSTKSRNPHASSLLKKGYRESAFAFAISA 153

  Fly   623 ATVTSFIARACRDGQLASCSCSRGSRPKQLHDD-------------------------------- 655
            |.|...:||||..|:|.||.|......|.|:.:                                
  Fly   154 AGVAHSVARACSQGRLMSCGCDPTINRKTLNKNLRQSLDKEKKQFLQYLETNQILTPEEEKKYER 218

  Fly   656 ------WKWGGCGDNLEFAYKFATDFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGI 714
                  ||||||..|::|..:::..|:|.|||..:                              
  Fly   219 SKIASRWKWGGCSHNMDFGVEYSKLFLDCREKAGD------------------------------ 253

  Fly   715 KRNKNVDAKNDTSLVVRNVRKSTEAENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQE 779
                                                                          :|.
  Fly   254 --------------------------------------------------------------IQS 256

  Fly   780 KIKQEIVNTKFFKGEQQPRKKKRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNL 844
            ||                                                             ||
  Fly   257 KI-------------------------------------------------------------NL 260

  Fly   845 HNNEAGRRAVIKKARITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGA-----------T 898
            |||.|||.||.......|||||:||||.|.|||:.......:|..|:.::..|           .
  Fly   261 HNNHAGRIAVSNNMEFRCKCHGMSGSCQLKTCWKSAPDFHIVGKVLKHQFRKAILVDQSNLGNGE 325

  Fly   899 KVKINKRGR----------------LQIKDLQ------------------------FKVPTAH-- 921
            .|.:.||.|                |...|..                        .:.|:|.  
  Fly   326 PVVVLKRARNKKSNGGSGSGSTSPDLDSTDASGGHDDGGTGDSETRRHDELGVERGTRQPSADKN 390

  Fly   922 ----------DLIYLDESPDWCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVN 976
                      .|.|...||::|.........||.||.|::|::..:.|..||||||::  .:|..
  Fly   391 AARMARKLETSLFYYQRSPNFCERDLGADIQGTVGRKCNRNTTTSDGCTSLCCGRGHS--QVIQR 453

  Fly   977 --ERCNCKFHWCCQVKCEVC 994
              |||:|||.|||.|:||.|
  Fly   454 RAERCHCKFQWCCNVECEEC 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 121/547 (22%)
Wnt10NP_609109.3 wnt 82..466 CDD:278536 115/538 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456826
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.