DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt5 and Wnt4

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001260187.1 Gene:Wnt4 / 34007 FlyBaseID:FBgn0010453 Length:539 Species:Drosophila melanogaster


Alignment Length:714 Identity:151/714 - (21%)
Similarity:222/714 - (31%) Gaps:306/714 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 SPKCIRQRRREEQQRQRERDEWFRGQSQY------MQPRFEPIIQTI--NNTKRFAVSIEIPDSF 437
            :|....|:.::.||.|:.:..    ||.:      |.   ..|:.|:  ||..:..         
  Fly    42 NPAIHHQQHQQHQQHQQHQQH----QSNHNLNNGNMN---STILNTLMGNNAGQVV--------- 90

  Fly   438 KVSSEGSDGELLSRVERSQPSISSSSSSSSSSSRKIMPDYIKVSMENNTSVTDYFKHDVVMTSAD 502
             .||.|..|.:::::..|..|:.|.......|........:.:.:..|         .:.:.|: 
  Fly    91 -NSSPGGGGSMINQLGSSTSSVPSVIGGGVGSVGNPWHSAVGLGVPGN---------GMGLPSS- 144

  Fly   503 VASDREFLIKNMEEHGGAGSANSH-HNDT----------------TPTADAYSET---------- 540
                          ||..|:..|| |...                .|....|..|          
  Fly   145 --------------HGLGGNMGSHPHGHALAGLAKLGIIVPGGQGLPGNLGYGGTMLNGGGVGGA 195

  Fly   541 ------IDLNPNNCYSAIGLSNS------------------------------QKKQCVKHTSVM 569
                  |..|.||.....||.|.                              |..||.|.|.:.
  Fly   196 AGMGLGIGSNTNNMDMQQGLYNEHFISEHTVMAVFTSQGQVGGPCRYMPATRRQNHQCRKETGLP 260

  Fly   570 PAISRGARAAIQECQFQFKNRRWNCS--TTNDETVFGPMTSLAAPEMAFIHALAAATVTSFIARA 632
            ..:|...|.|...|:.||:..|||||  |.....:|..:..    |.||:|||.||.:|..||||
  Fly   261 GTLSEARRLATTHCEEQFRYDRWNCSIETRGKRNIFKKLYK----ETAFVHALTAAAMTHSIARA 321

  Fly   633 CRDGQLASCSCSRGSRPKQLHD----DWKWGGCGDNLEFAYKFATDFIDSREKETNRETRGVKRK 693
            |.:|::..|||.    ||: |:    |::||||.|||:...:....|:|.|..:.:         
  Fly   322 CAEGRMTKCSCG----PKK-HNREAQDFQWGGCNDNLKHGKRVTRSFLDLRGGDGD--------- 372

  Fly   694 REEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENSHILNENFDQHLLELEQ 758
                                                          |.|.||.            
  Fly   373 ----------------------------------------------EVSEILR------------ 379

  Fly   759 RITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRAAADAPAYPRNGIKESY 823
                                                                             
  Fly   380 ----------------------------------------------------------------- 379

  Fly   824 KDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCSLITCWQQLSSIREIGD 888
                                 |::|.|..||..:....|||||||||||:.|||::::.......
  Fly   380 ---------------------HDSEVGIEAVSSQMMDKCKCHGVSGSCSMKTCWKKMADFNATAT 423

  Fly   889 YLREKYEGATKVKINKRGRLQIKDLQFKVPTAH----------DLIYLDESPDWCRNSYALHWPG 943
            .||:||..|.:...|:|...|:...:.|.|...          .|.||:.||.:|        ..
  Fly   424 LLRQKYNEAIRKAPNQRSMRQVSSSRMKKPKQRRKKPQQSQYTTLYYLETSPSYC--------AV 480

  Fly   944 THGRVC-HKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFH--WCCQVKCEVCTKVLEEHTCK 1004
            |..|.| |.     ::|..|||||||.|:.:...|:|.|:|:  .|||:.|:.|.::..::.||
  Fly   481 TKDRQCLHP-----DNCGTLCCGRGYTTQVVKQVEKCRCRFNNGRCCQLICDYCQRLENKYFCK 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 113/498 (23%)
Wnt4NP_001260187.1 wnt 246..539 CDD:278536 111/467 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456819
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR12027
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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