DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt5 and Wnt9b

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001100525.1 Gene:Wnt9b / 303586 RGDID:1309574 Length:359 Species:Rattus norvegicus


Alignment Length:506 Identity:140/506 - (27%)
Similarity:198/506 - (39%) Gaps:207/506 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   519 GAGSANSHHNDTTPT-ADAYSETIDLNPNNCYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQE 582
            |.|:|      ..|. |.|:.:..||        :.||..||:.|.:...:...:...|...:.|
  Rat    40 GPGTA------AAPAQAGAHLKQCDL--------LKLSRWQKQLCRREPGLAETLRDAAHLGLLE 90

  Fly   583 CQFQFKNRRWNCSTTNDETVFGPMTSL---AAPEMAFIHALAAATVTSFIARACRDGQLASCSC- 643
            |||||:..|||||...       .|.|   ...|.||::|::||.:|..:||||..|::..|:| 
  Rat    91 CQFQFRQERWNCSLEG-------RTGLLQRGFKETAFLYAVSAAALTHALARACSAGRMERCTCD 148

  Fly   644 -SRGSRPKQLHDDWKWGGCGDNLEFAYKFATDFIDSREKETNRETRGVKRKREEINKNRMHSDDT 707
             |.|...:|.   |:||.|||||:::.||.::|                                
  Rat   149 DSPGLESRQA---WQWGVCGDNLKYSTKFLSNF-------------------------------- 178

  Fly   708 NAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENSHILNENFDQHLLELEQRITKEILTSKIDEE 772
                :|.||..                                                      
  Rat   179 ----LGPKRGS------------------------------------------------------ 185

  Fly   773 EMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVK 837
                                          |:.||.|||                          
  Rat   186 ------------------------------KDLRARADA-------------------------- 194

  Fly   838 ARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKVK- 901
                   ||...|.:||....|.|||||||||||::.|||:|||..||.|..|:.:|:.|.||. 
  Rat   195 -------HNTHVGIKAVKSGLRTTCKCHGVSGSCAVRTCWKQLSPFRETGQVLKLRYDTAVKVSS 252

  Fly   902 -INKR-GRLQI----------KDLQFKVPTAHDLIYLDESPDWCRNS-YALHWPGTHGRVCHKNS 953
             .|:. |||::          |.|   .|...||:|:::||.:||.| |:   |||.||||.:::
  Rat   253 ATNEALGRLELWVPAKPGGPAKGL---APRPVDLVYMEDSPSFCRPSKYS---PGTAGRVCSRDT 311

  Fly   954 SGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHTCK 1004
                ||:.|||||||:|::.:|...|:|:..|||.|:|:.|.:....:|||
  Rat   312 ----SCSSLCCGRGYDTQSRMVAFSCHCQVQWCCYVECQQCAQQELVYTCK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 130/468 (28%)
Wnt9bNP_001100525.1 wnt 62..358 CDD:278536 130/468 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345753
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

Return to query results.
Submit another query.