DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and wnt5b

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_017210434.1 Gene:wnt5b / 30105 ZFINID:ZDB-GENE-980526-87 Length:380 Species:Danio rerio


Alignment Length:457 Identity:155/457 - (33%)
Similarity:222/457 - (48%) Gaps:145/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....|||..|:|.|..:...|..|..||:..|:|||:||:.|||||||.::.:|||.:..:.:.
Zfish    69 CSQLTGLSQGQRKLCQLYQDHMVYIGEGAKTGIKECQYQFRQRRWNCSTVDNTSVFGRVMHIGSR 133

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGDNLEFAYKFATDFID 677
            |.||.:|::||.|.:.::||||:|:|::|.|||.:||:.|..||.|||||||:.:.|:||.:|:|
Zfish   134 ETAFTYAVSAAGVVNAVSRACREGELSTCGCSRAARPRDLPRDWLWGGCGDNVNYGYRFAREFVD 198

  Fly   678 SREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENS 742
            :||:|.|                                                          
Zfish   199 AREREKN---------------------------------------------------------- 205

  Fly   743 HILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRA 807
                                                                             
Zfish   206 ----------------------------------------------------------------- 205

  Fly   808 AADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCS 872
                  |||..::.                ||:||||.||||||.||...|.:.|||||||||||
Zfish   206 ------YPRGSVEH----------------ARTLMNLQNNEAGRMAVYNLANVACKCHGVSGSCS 248

  Fly   873 LITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDLQFKVPTAHDLIYLDESPDWCRNSY 937
            |.|||.||:..|.:|::|:|||:.|..::||:||:|::.:.:|..||..||:|:|.|||:|..:.
Zfish   249 LKTCWLQLADFRRVGEFLKEKYDSAAAMRINRRGKLELVNNRFNPPTGEDLVYIDPSPDYCLRNE 313

  Fly   938 ALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHT 1002
            .....||.||:|:|.|.|::.|.::||||||:......:|||:|||||||.|||:.||.::::..
Zfish   314 TTGSLGTQGRLCNKTSEGMDGCELMCCGRGYDQFKTYKHERCHCKFHWCCYVKCKRCTSLVDQFV 378

  Fly  1003 CK 1004
            ||
Zfish   379 CK 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 151/449 (34%)
wnt5bXP_017210434.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586773
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12027
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2901
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
88.470

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