DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and Wnt5b

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001093959.1 Gene:Wnt5b / 282582 RGDID:628850 Length:372 Species:Rattus norvegicus


Alignment Length:457 Identity:155/457 - (33%)
Similarity:225/457 - (49%) Gaps:145/457 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....|||..|:|.|..:...|..|..||:..|:|||.||:.|||||||.::.:|||.:..:.:.
  Rat    61 CSQLPGLSPGQRKLCQLYQEHMSYIGEGAKTGIRECQHQFRQRRWNCSTVDNLSVFGRVMQIGSR 125

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGDNLEFAYKFATDFID 677
            |.||.:|::||.|.:.|:||||:|:|::|.|||.:|||.|..||.|||||||:|:.|:||.:|:|
  Rat   126 ETAFTYAVSAAGVVNAISRACREGELSTCGCSRAARPKDLPRDWLWGGCGDNVEYGYRFAKEFVD 190

  Fly   678 SREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTEAENS 742
            :||:|.|                                                          
  Rat   191 AREREKN---------------------------------------------------------- 197

  Fly   743 HILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRKNQRA 807
                                                           |.||.::           
  Rat   198 -----------------------------------------------FAKGSEE----------- 204

  Fly   808 AADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVSGSCS 872
                                         :.|:||||.|||||||||.|.|.::|||||||||||
  Rat   205 -----------------------------QGRALMNLQNNEAGRRAVYKMADVSCKCHGVSGSCS 240

  Fly   873 LITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDLQFKVPTAHDLIYLDESPDWCRNSY 937
            |.|||.||:..|::||.|:|||:.|..::|.::|:|::.:.:|..|:..||:|:|.|||:|..:.
  Rat   241 LKTCWLQLAEFRKVGDRLKEKYDSAAAMRITRQGKLELTNSRFNQPSPEDLVYVDPSPDYCLRNE 305

  Fly   938 ALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHT 1002
            .....||.||:|:|.|.|.:.|.::||||||:....:..|||:|:|||||.|:|:.||::::::.
  Rat   306 TTGSLGTQGRLCNKTSEGTDGCELMCCGRGYDRFKSVQVERCHCRFHWCCFVRCKKCTEIVDQYV 370

  Fly  1003 CK 1004
            ||
  Rat   371 CK 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 151/449 (34%)
Wnt5bNP_001093959.1 Wnt 61..372 CDD:393294 153/455 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345783
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003382
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12027
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.840

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