DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and Wnt1

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_067254.1 Gene:Wnt1 / 22408 MGIID:98953 Length:370 Species:Mus musculus


Alignment Length:490 Identity:140/490 - (28%)
Similarity:201/490 - (41%) Gaps:176/490 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   528 NDTTPTADAYSETIDLNPNNCYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRW 592
            :.|....|:.|..:.|.|    |...||..|::...::..::.::|.|.::|::||::||:||||
Mouse    42 SSTNLLTDSKSLQLVLEP----SLQLLSRKQRRLIRQNPGILHSVSGGLQSAVRECKWQFRNRRW 102

  Fly   593 NCSTTNDETVFGPMTSLAAPEMAFIHALAAATVTSFIARACRDGQLASCSCSRGSR----PKQLH 653
            ||.|.....:||.:.:....|.|||.|:.:|.||..:||:|.:|.:.||:|....|    |    
Mouse   103 NCPTAPGPHLFGKIVNRGCRETAFIFAITSAGVTHSVARSCSEGSIESCTCDYRRRGPGGP---- 163

  Fly   654 DDWKWGGCGDNLEFAYKFATDFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNK 718
             ||.||||.||::|...|..:|:||.||..:                                  
Mouse   164 -DWHWGGCSDNIDFGRLFGREFVDSGEKGRD---------------------------------- 193

  Fly   719 NVDAKNDTSLVVRNVRKSTEAENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQ 783
                                                                             
Mouse   194 ----------------------------------------------------------------- 193

  Fly   784 EIVNTKFFKGEQQPRKKKRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNE 848
                                                                  .|.||||||||
Mouse   194 ------------------------------------------------------LRFLMNLHNNE 204

  Fly   849 AGRRAVIKKARITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKVKINKRG------- 906
            |||..|..:.|..|||||:||||::.|||.:|.::|.:||.||::::||::|....||       
Mouse   205 AGRTTVFSEMRQECKCHGMSGSCTVRTCWMRLPTLRAVGDVLRDRFDGASRVLYGNRGSNRASRA 269

  Fly   907 ---RLQIKDLQFKVPTAHDLIYLDESPDWCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGY 968
               ||:.:|...|.|:.|||:|.::||::|..|..|...||.||.|:.:|..|:.|.:||||||:
Mouse   270 ELLRLEPEDPAHKPPSPHDLVYFEKSPNFCTYSGRLGTAGTAGRACNSSSPALDGCELLCCGRGH 334

  Fly   969 NTKNIIVNERCNCKFHWCCQVKCEVCTKVLEEHTC 1003
            .|:...|.|||||.|||||.|.|..||.....|.|
Mouse   335 RTRTQRVTERCNCTFHWCCHVSCRNCTHTRVLHEC 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 134/464 (29%)
Wnt1NP_067254.1 WNT1 60..370 CDD:128408 135/468 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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