DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt5 and cwn-1

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_493668.1 Gene:cwn-1 / 173399 WormBaseID:WBGene00000857 Length:372 Species:Caenorhabditis elegans


Alignment Length:471 Identity:132/471 - (28%)
Similarity:194/471 - (41%) Gaps:154/471 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   547 NCYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAA 611
            :|.|..||:..|.:.|.|:..:|.::..|:.||..||||||..|||||      |:..|:|....
 Worm    41 SCKSLKGLTRRQMRFCKKNIDLMESVRSGSLAAHAECQFQFHKRRWNC------TLIDPVTHEVI 99

  Fly   612 P---------EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDDWKWGGCGDNLEF 667
            |         |.||:||:::|.|...:.|.|..|....|.|............:::.||.||::|
 Worm   100 PDVFLYENTRESAFVHAISSAAVAYKVTRDCARGISERCGCDYSKNDHSGKSQFQYQGCSDNVKF 164

  Fly   668 AYKFATDFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRN 732
            ....:.:|:||.::..                 .|..||                 |.|||:   
 Worm   165 GIGVSKEFVDSAQRRV-----------------LMMKDD-----------------NGTSLL--- 192

  Fly   733 VRKSTEAENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQP 797
                                                                             
 Worm   193 ----------------------------------------------------------------- 192

  Fly   798 RKKKRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITC 862
                                |..:...||            ..::|||||:|||:.:.|..|..|
 Worm   193 --------------------GPSQLSADG------------MHMINLHNNQAGRQVLEKSLRREC 225

  Fly   863 KCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKVKINK-----RGRLQIKDLQFKVPTAHD 922
            ||||:||||.:.|||..|.:.|.||..:::|::||.:||:.|     :.|:.:|:.|||..|..|
 Worm   226 KCHGMSGSCEMRTCWDSLPNFRHIGMAIKDKFDGAAEVKVVKEDGIEKPRIVMKNSQFKRHTNAD 290

  Fly   923 LIYLDESPDWCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCC 987
            |:|:..|||:|.:.......||.||.|....:.::.|::|||||||..|..||.|:|||||.:||
 Worm   291 LVYMTPSPDFCESDPLRGILGTKGRQCTLAPNAIDDCSLLCCGRGYEKKVQIVEEKCNCKFIYCC 355

  Fly   988 QVKCEVCTKVLEEHTC 1003
            :|:||.|.|.:|::.|
 Worm   356 EVRCEPCQKRIEKYLC 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 129/464 (28%)
cwn-1NP_493668.1 WNT1 44..372 CDD:128408 131/468 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H22529
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.