DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and Wnt2b

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001178777.1 Gene:Wnt2b / 116466 RGDID:69346 Length:391 Species:Rattus norvegicus


Alignment Length:462 Identity:142/462 - (30%)
Similarity:197/462 - (42%) Gaps:158/462 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTN-DETVFGPMTSLAA 611
            |.:..||.:.|::.|.::..:|.::..|||..|:|||.||::.||||:|.: |.||||.....::
  Rat    72 CDNIPGLVSRQRQLCQRYPDIMRSVGEGAREWIRECQHQFRHHRWNCTTLDRDHTVFGRAMLRSS 136

  Fly   612 PEMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHD---DWKWGGCGDNLEFAYKFAT 673
            .|.||::|:::|.|...|.|||..|:|:.|||...:|.:. ||   |:.||||.||:.:..:||.
  Rat   137 REAAFVYAISSAGVVHAITRACSQGELSVCSCDPYTRGRH-HDQRGDFDWGGCSDNIHYGVRFAK 200

  Fly   674 DFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTE 738
            .|:|::||.                                                        
  Rat   201 AFVDAKEKR-------------------------------------------------------- 209

  Fly   739 AENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRK 803
                                                                             
  Rat   210 ----------------------------------------------------------------- 209

  Fly   804 NQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVS 868
                               .||            ||:|||||||..||.||.:..::.|||||||
  Rat   210 -------------------LKD------------ARALMNLHNNRCGRTAVRRFLKLECKCHGVS 243

  Fly   869 GSCSLITCWQQLSSIREIGDYLREKYEGATKVKINKRGRLQIKDLQ-FKVPTAHDLIYLDESPDW 932
            |||:|.|||:.||..|..|||||.:|:||.:|...:.|.......| ::..|..||:|.|.|||:
  Rat   244 GSCTLRTCWRALSDFRRTGDYLRRRYDGAVQVTATQDGANFTAARQGYRHATRTDLVYFDNSPDY 308

  Fly   933 CRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVKCEVCTKV 997
            |....|....||.||||.|.|.|.:.|.|:||||||:|..:....:|.|||||||.|:|:.|...
  Rat   309 CVLDKAAGSLGTAGRVCSKTSKGTDGCEIMCCGRGYDTTRVTRVTQCECKFHWCCAVRCKECRNT 373

  Fly   998 LEEHTCK 1004
            ::.||||
  Rat   374 VDVHTCK 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 138/454 (30%)
Wnt2bNP_001178777.1 wnt 78..380 CDD:278536 138/454 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345756
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3913
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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