DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wnt5 and wnt7c

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_031747904.1 Gene:wnt7c / 100490426 XenbaseID:XB-GENE-5835754 Length:350 Species:Xenopus tropicalis


Alignment Length:468 Identity:130/468 - (27%)
Similarity:187/468 - (39%) Gaps:169/468 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   548 CYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDETVFGPMTSLAAP 612
            |....|||..|:..|......|.|:..|||...:|||:||::.||||::..:.:|||....:.:.
 Frog    39 CRKMPGLSPRQRTICEARPDAMIAVGTGARLGTEECQYQFQHSRWNCTSLGEPSVFGQELKVGSR 103

  Fly   613 EMAFIHALAAATVTSFIARACRDGQLASCSCSRGSRPKQLHDD----WKWGGCGDNLEFAYKFAT 673
            |.||.:|:.:|.:...|..||..|.|..|||   .|.|..:.|    |:||||..::::..:|:.
 Frog   104 ETAFYYAILSAGIAHSITNACSQGNLTYCSC---DREKNGYQDPEKGWRWGGCSADVKYGIRFSR 165

  Fly   674 DFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLVVRNVRKSTE 738
            :|:|:||                                 :|||                     
 Frog   166 EFVDARE---------------------------------VKRN--------------------- 176

  Fly   739 AENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGEQQPRKKKRK 803
                                                                             
 Frog   177 ----------------------------------------------------------------- 176

  Fly   804 NQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKARITCKCHGVS 868
                                              ||:|||||||..||:.:.|...:.|||||||
 Frog   177 ----------------------------------ARTLMNLHNNMVGRKLLEKNIHLECKCHGVS 207

  Fly   869 GSCSLITCWQQLSSIREIGDYLREKYEGATKVKINKRGR-------LQIKDLQ-FKVPTAHDLIY 925
            |||:|.|||..|...||:|..:.:||:.|..|:. .|||       |::|:.| :..|...||:|
 Frog   208 GSCTLKTCWLTLPHFREVGYAIMDKYKQAVMVEA-VRGRRQLLPTFLKLKNPQSYSKPAETDLVY 271

  Fly   926 LDESPDWCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCKFHWCCQVK 990
            :|.||.:|....|....||:||.|::.|:..:||.:|||||||.|.......:|:|||||||.|.
 Frog   272 VDRSPSFCEKDNATGSIGTYGRFCNRTSTQADSCELLCCGRGYKTFQYTHTWQCHCKFHWCCHVT 336

  Fly   991 CEVCTKVLEEHTC 1003
            |..|::..:.:||
 Frog   337 CSTCSERTQAYTC 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 128/462 (28%)
wnt7cXP_031747904.1 Wnt_Wnt7 38..350 CDD:381713 130/468 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326151at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.