DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and wnt3a

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_002939354.2 Gene:wnt3a / 100488632 XenbaseID:XB-GENE-1217288 Length:352 Species:Xenopus tropicalis


Alignment Length:477 Identity:138/477 - (28%)
Similarity:195/477 - (40%) Gaps:165/477 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 YSETIDLNPNNCYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDE- 600
            || |:...|..|.:..||...|.:.|..:..:||:::.|.:..|||||.||:.|||||:|.||. 
 Frog    32 YS-TLGTQPIPCGTIPGLVAKQMRFCRNYMEIMPSVAEGVKIGIQECQHQFRGRRWNCTTVNDNL 95

  Fly   601 TVFGPMTSLAAPEMAFIHALAAATVTSFIARACRDGQLASCSC-SRGSRPKQLHDDWKWGGCGDN 664
            .:|||:...|..|.||:||:|:|.|...:.|:|.:|....|.| |....|.  .:.||||||.::
 Frog    96 AIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGSATICGCDSHHKGPP--GEGWKWGGCSED 158

  Fly   665 LEFAYKFATDFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTSLV 729
            ::|....:.:|.|:||...:                                             
 Frog   159 MDFGSMVSREFADARENRPD--------------------------------------------- 178

  Fly   730 VRNVRKSTEAENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFKGE 794
                                                                             
 Frog   179 ----------------------------------------------------------------- 178

  Fly   795 QQPRKKKRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKKAR 859
                                                       |||.||.|||||||.:::....
 Frog   179 -------------------------------------------ARSAMNRHNNEAGRTSILDHRH 200

  Fly   860 ITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKVKINK----RG---RLQIKDLQFKV 917
            :.|||||:||||.:.|||......|.|||||::||:.|:::.:.|    ||   .|:.|...||.
 Frog   201 LKCKCHGLSGSCEVKTCWWSQPDFRVIGDYLKDKYDSASEMVVEKHRESRGWVETLRPKYTFFKP 265

  Fly   918 PTAHDLIYLDESPDWCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCNCK 982
            ||..||||.:.||::|..:......||..|||:..|.|::.|.:||||||:||:.....|:|:|.
 Frog   266 PTERDLIYYESSPNFCEPNPETGSFGTRDRVCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCI 330

  Fly   983 FHWCCQVKCEVCTKVLEEHTCK 1004
            |||||.|.|:.|.:|.:.||||
 Frog   331 FHWCCYVSCQECIRVYDVHTCK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 130/458 (28%)
wnt3aXP_002939354.2 Wnt_Wnt3_Wnt3a 39..352 CDD:381709 133/467 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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