DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wnt5 and wnt3

DIOPT Version :9

Sequence 1:NP_001285407.1 Gene:Wnt5 / 32838 FlyBaseID:FBgn0010194 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001096552.1 Gene:wnt3 / 100125198 XenbaseID:XB-GENE-479567 Length:354 Species:Xenopus tropicalis


Alignment Length:479 Identity:136/479 - (28%)
Similarity:194/479 - (40%) Gaps:169/479 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 YSETIDLNPNNCYSAIGLSNSQKKQCVKHTSVMPAISRGARAAIQECQFQFKNRRWNCSTTNDE- 600
            || |:...|..|.|..||...|.:.|..:..:||:::.|.:..|||||.||:.|||||:|.:|. 
 Frog    34 YS-TLGSQPILCGSIPGLVPKQMRFCRNYIEIMPSVAEGIKLGIQECQHQFRGRRWNCTTIHDSL 97

  Fly   601 TVFGPMTSLAAPEMAFIHALAAATVTSFIARACRDGQLASCSCS---RGSRPKQLHDDWKWGGCG 662
            .:|||:...|..|.||:||:|:|.|...:.|:|.:|....|.|.   :||.    .|.||||||.
 Frog    98 AIFGPVLDKATRESAFVHAIASAGVAFAVTRSCAEGSSTICGCDSHHKGSP----GDGWKWGGCS 158

  Fly   663 DNLEFAYKFATDFIDSREKETNRETRGVKRKREEINKNRMHSDDTNAFNIGIKRNKNVDAKNDTS 727
            ::.:|....:.:|.|:||...:                                           
 Frog   159 EDADFGVLVSREFADARENRPD------------------------------------------- 180

  Fly   728 LVVRNVRKSTEAENSHILNENFDQHLLELEQRITKEILTSKIDEEEMIKLQEKIKQEIVNTKFFK 792
                                                                             
 Frog   181 ----------------------------------------------------------------- 180

  Fly   793 GEQQPRKKKRKNQRAAADAPAYPRNGIKESYKDGGILPRSTATVKARSLMNLHNNEAGRRAVIKK 857
                                                         |||.||.|||||||..::..
 Frog   181 ---------------------------------------------ARSAMNRHNNEAGRATILDH 200

  Fly   858 ARITCKCHGVSGSCSLITCWQQLSSIREIGDYLREKYEGATKVKINK----RG---RLQIKDLQF 915
            ..:.|||||:||||.:.|||......|.|||:|::||:.|:::.:.|    ||   .|:.|...|
 Frog   201 MHLRCKCHGLSGSCEVKTCWWSQPDFRAIGDHLKDKYDSASEMSVEKHRESRGWVETLRAKYSLF 265

  Fly   916 KVPTAHDLIYLDESPDWCRNSYALHWPGTHGRVCHKNSSGLESCAILCCGRGYNTKNIIVNERCN 980
            |.||..||:|.:.||::|..:......||.||.|:..|.|::.|.:||||||:||:.....|:|:
 Frog   266 KPPTERDLVYYETSPNFCEPNPETGSFGTQGRSCNVTSHGIDGCDLLCCGRGHNTRTEKRKEKCH 330

  Fly   981 CKFHWCCQVKCEVCTKVLEEHTCK 1004
            |.|||||.|.|:.|.::.:.||||
 Frog   331 CIFHWCCYVSCQECVRIYDVHTCK 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wnt5NP_001285407.1 wnt 554..1004 CDD:278536 127/460 (28%)
wnt3NP_001096552.1 Wnt_Wnt3_Wnt3a 41..354 CDD:381709 131/469 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X108
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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