DRSC/TRiP Functional Genomics Resources

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Protein Alignment Xrcc2 and XRCC2

DIOPT Version :10

Sequence 1:NP_573302.1 Gene:Xrcc2 / 32837 FlyBaseID:FBgn0030931 Length:250 Species:Drosophila melanogaster
Sequence 2:NP_005422.1 Gene:XRCC2 / 7516 HGNCID:12829 Length:280 Species:Homo sapiens


Alignment Length:159 Identity:39/159 - (24%)
Similarity:67/159 - (42%) Gaps:16/159 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LVEISGPGNSGKSLVLQQLVAHCLVPYKFGGRQWSVLLINLSHKINRESLAKSIRMELKAYSVGE 85
            ::|..||..:||:.:|..|.|.|::|...||.:..||.|:..:..:...|...:...|...|   
Human    43 ILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRLSQSS--- 104

  Fly    86 VIAAKCPTEEQLAEIAGECMSRVRFLNCFANDDVSTSLIDARYAIINDPGIQLVAMDTLSEFYWL 150
                        .||...|:.|...:.|.::..:..:|........:.|.:.|:.:|:||.|||:
Human   105 ------------EEIIKYCLGRFFLVYCSSSTHLLLTLYSLESMFCSHPSLCLLILDSLSAFYWI 157

  Fly   151 DEPKIAKRMSMYRH-YRLLQARLEKLCKD 178
            |.....:.:::... .|.....||||..|
Human   158 DRVNGGESVNLQESTLRKCSQCLEKLVND 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Xrcc2NP_573302.1 P-loop containing Nucleoside Triphosphate Hydrolases 21..>178 CDD:476819 38/157 (24%)
XRCC2NP_005422.1 XRCC2 41..243 CDD:410898 39/159 (25%)
nucleotide binding domain A 48..55 3/6 (50%)
nucleotide binding domain B 145..150 1/4 (25%)

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