DRSC/TRiP Functional Genomics Resources

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Protein Alignment Xrcc2 and LOC4576547

DIOPT Version :10

Sequence 1:NP_573302.1 Gene:Xrcc2 / 32837 FlyBaseID:FBgn0030931 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_001237167.3 Gene:LOC4576547 / 4576547 VectorBaseID:AGAMI1_009148 Length:310 Species:Anopheles gambiae


Alignment Length:147 Identity:37/147 - (25%)
Similarity:70/147 - (47%) Gaps:1/147 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SHQLHFAVFGSCGFEADTLVEISGPGNSGKSLVLQQLVAHCLVPYKFGGRQWSVLLINLSHKINR 67
            :|.:...:|...|.....|:||||..||||||:..:|:|..::|...||.:...:||...:..::
Mosquito    22 THNVDTVLFPDGGLRPGELIEISGDSNSGKSLLCLELIARIILPTSCGGLELGAVLIGCENSYSK 86

  Fly    68 ESLAKSIRMELKAYSVGEVIAAKCPTEEQLAEIAGECMSRVRFLNCFANDDVSTSLIDARYAIIN 132
            ..|...:...:..:: ...:|:......||..|....:||:..:.|::.:....||:......:.
Mosquito    87 TVLLSILEKHILNHA-EPALASTLTDPHQLETIQRAALSRLHLITCYSLEQFEFSLLALPALFVK 150

  Fly   133 DPGIQLVAMDTLSEFYW 149
            .|.:..|.:|:::.|||
Mosquito   151 QPQLTFVLIDSIATFYW 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Xrcc2NP_573302.1 P-loop containing Nucleoside Triphosphate Hydrolases 21..>178 CDD:476819 34/129 (26%)
LOC4576547XP_001237167.3 None

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