DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Xrcc2 and xrcc2

DIOPT Version :10

Sequence 1:NP_573302.1 Gene:Xrcc2 / 32837 FlyBaseID:FBgn0030931 Length:250 Species:Drosophila melanogaster
Sequence 2:XP_002932541.3 Gene:xrcc2 / 100486989 XenbaseID:XB-GENE-6083458 Length:282 Species:Xenopus tropicalis


Alignment Length:191 Identity:43/191 - (22%)
Similarity:79/191 - (41%) Gaps:26/191 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LVEISGPGNSGKSLVLQQLVAHCLVPYKFGGRQWSVLLINLSHKINRESLAKSIRMELKAYSVGE 85
            :.|..||..:||:.:|..|::.|::|...||.|..|:.|:..:..:...|...:...|       
 Frog    46 ITEFYGPEGTGKTEMLCHLISRCILPKSDGGLQVEVIYIDTDYHFDMLRLVTILEHRL------- 103

  Fly    86 VIAAKCPTEEQLAEIAGECMSRVRFLNCFANDDVSTSLIDARYAIINDPGIQLVAMDTLSEFYWL 150
                    .:...|...:|:.|...|.|.::..:..:|........:.|.:.|:.:|::|.|||:
 Frog   104 --------AQNTEEAVKQCLGRFFLLYCNSSVQLLLTLYSLENMFCSHPSLCLLIIDSISAFYWI 160

  Fly   151 DE----PKIAKRMSMYRHYRLLQARLEKLCKDAIVCGMYTVESAFLE---NRFGENLPEAG 204
            |.    ...||:.:..|....|   |.||.|:..:. ::....|.::   |..||....:|
 Frog   161 DRNNGGETFAKQETNLRKCTEL---LHKLLKEYQLV-LFASTQAIMQKSPNEAGEGPSRSG 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Xrcc2NP_573302.1 P-loop containing Nucleoside Triphosphate Hydrolases 21..>178 CDD:476819 37/160 (23%)
xrcc2XP_002932541.3 XRCC2 44..246 CDD:410898 43/191 (23%)

Return to query results.
Submit another query.