DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgant7 and galnt16

DIOPT Version :10

Sequence 1:NP_573301.2 Gene:Pgant7 / 32836 FlyBaseID:FBgn0030930 Length:591 Species:Drosophila melanogaster
Sequence 2:NP_001039091.1 Gene:galnt16 / 733908 XenbaseID:XB-GENE-986567 Length:562 Species:Xenopus tropicalis


Alignment Length:619 Identity:208/619 - (33%)
Similarity:299/619 - (48%) Gaps:111/619 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RICRLALCLLV---LLPLLYLLANWSDHHKRVQEAYHTRFGGPKFAHQRLEGRPREVPKLVDGLG 71
            ||...|:.:|.   :|...|.|  |.|...      |...........|..|| :||.:      
 Frog     3 RIRANAIAILTVAWILGTFYYL--WQDSKP------HAAASSKSPGRSRAAGR-QEVHR------ 52

  Fly    72 NFEPKDVKPRSGP--------GENGEAHSLSPDKKHMSD----ASE---MEYGMNIACSDEISMH 121
                   :.|:.|        .|.|:.:... :|.::|.    |.|   .::..|...||::|..
 Frog    53 -------EDRTSPEAVTLAFQTEKGKLNGFD-EKSYLSSKFIKAGEDPYRQHAFNQLESDKLSSE 109

  Fly   122 RSVRDTRLEECRHWDYPFDLPRTSVIIVFHNEGFSVLMRTVHSVIDRSPTHMLHEIILVDDFS-- 184
            |.:||||...|....:..|||.|||||.||||..|.|:||:.||:.|||.:::.|||||||||  
 Frog   110 RPIRDTRHYRCTSVHHDNDLPSTSVIITFHNEARSTLLRTIKSVLIRSPGNLIQEIILVDDFSTD 174

  Fly   185 -DKENLRSQLDEYVLQFKGLVKVIRNKEREGLIRTRSRGAMEATGEVIVFLDAHCEVNTNWLPPL 248
             |...|.:::.:        ||.:||..||||||:|.|||..|...|:.|||:|||||..||.||
 Frog   175 PDDCQLLTKIPK--------VKCLRNNRREGLIRSRVRGAELAAAPVLTFLDSHCEVNNEWLQPL 231

  Fly   249 LAPIYRDRTVMTVPIIDGIDHKNFEYRPVYGTDNHFRGIFEWGMLYKENEVPRREQRRRAHNSEP 313
            |..:..|.|.:..||||.|...||.|   .......||.|:|.:.:|..::|..::..|...:..
 Frog   232 LQRVKDDHTRVVSPIIDVISLDNFAY---LAASADLRGGFDWSLHFKWEQIPIEQKMSRTDPTSS 293

  Fly   314 YRSPTHAGGLFAINREYFLELGAYDPGLLVWGGENFELSFKIWQCGGSIEWVPCSRVGHVYRGFM 378
            .|:|..|||:|.|::.:|.:||.||..:.:||||||||||::|.||||:|.|||||||||:|...
 Frog   294 IRTPVIAGGIFVIDKSWFNQLGKYDTQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVFRKRH 358

  Fly   379 PYNFGKLASKKKGPLITI--NYKRVIETWFDDTHKEYFYTREPLARYLDMGDISEQLALKKRLNC 441
            ||.|      ..|..:|.  |.||.:|.|.|: :|:|:|...|.|.....|.:::::.|:|:|:|
 Frog   359 PYEF------PDGNALTYIKNTKRTVEVWMDE-YKQYYYQARPSAIGKSYGSVADRVELRKKLSC 416

  Fly   442 KSFQWFMDHIAYDVYDKFP------GLPANLHWGELRSVASDG-CL-----DSMGHQPPAIMGLT 494
            |||||::.::..::  |.|      ||           :...| |:     |:.|:.|  :| ||
 Frog   417 KSFQWYLQNVYPEL--KIPEKEVISGL-----------IKQGGNCMESQTRDTTGNIP--VM-LT 465

  Fly   495 YCHGGGNNQLVRLNAAGQLGVGE-------RC--VEADRQG--IKLAVCRLGTVDGPWQYNEHTK 548
            .|.|..|:    ..||.:..:.|       ||  :.:...|  :.|..|........|:...|  
 Frog   466 QCKGSANS----APAAQEWALSENVIKQQDRCLTISSFSTGALVMLEPCNQKDSRQKWKLKGH-- 524

  Fly   549 HLMHRVHKKCMALHPATQQLSLGHCDVNDSYQQW 582
            .|.|.....|:..|  :.:..:..|..:...|||
 Frog   525 FLQHIGSALCLDTH--STRAVINPCQSDLLSQQW 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pgant7NP_573301.2 pp-GalNAc-T 145..452 CDD:133004 138/311 (44%)
beta-trefoil_Ricin_GALNT7 464..586 CDD:467315 29/136 (21%)
galnt16NP_001039091.1 pp-GalNAc-T 133..427 CDD:133004 138/311 (44%)
beta-trefoil_Ricin_GALNT16 433..561 CDD:467357 32/146 (22%)

Return to query results.
Submit another query.