DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND2 and ND2

DIOPT Version :10

Sequence 1:YP_203371.1 Gene:ND2 / 3283493 -ID:- Length:345 Species:Xenopus tropicalis
Sequence 2:YP_009047266.1 Gene:ND2 / 19893529 FlyBaseID:FBgn0013680 Length:341 Species:Drosophila melanogaster


Alignment Length:354 Identity:143/354 - (40%)
Similarity:199/354 - (56%) Gaps:46/354 - (12%)


- Green bases have known domain annotations that are detailed below.


 Frog     8 MILSSLALGTILTVSSNHWFLAWMGLEINTLAIIPLMAQNHHPRAVEASTKYFLTQAAASALLLF 72
            :.::.:.:||::||:||.|..||||||||.|:.|||::.|::..:.|||.||||||..||.:|||
  Fly     9 LFITIMIIGTLITVTSNSWLGAWMGLEINLLSFIPLLSDNNNLMSTEASLKYFLTQVLASTVLLF 73

 Frog    73 SA----LNNAWFTGEWSIMNLTNSI--SCTTMTI--AICMKLGLAPFHFWLPEVLQGLNLTTGLI 129
            |:    |.|          |:.|.|  |.|:|.|  |:.:|.|.||||||.|.:::||.....|:
  Fly    74 SSILLMLKN----------NMNNEINESFTSMIIMSALLLKSGAAPFHFWFPNMMEGLTWMNALM 128

 Frog   130 LSTWQKLAP-MAILYQISPSMNTSLLLLIG-LTSTLIGGWGGLNQTQLRKILAFSSIAHLGWMAS 192
            |.||||:|| |.|.|     :|...||||. :.|.:||..||||||.|||::|||||.|||||.|
  Fly   129 LMTWQKIAPLMLISY-----LNIKYLLLISVILSVIIGAIGGLNQTSLRKLMAFSSINHLGWMLS 188

 Frog   193 ILPIMPQLMILNLIIYLIMTSTLFLTLKTISSTKISTLATSWPKTPTTTALTL-LTLLSLGGLPP 256
            .|.|...:.::....|..::..|...........::.| .||.........|| :..||||||||
  Fly   189 SLMISESIWLIYFFFYSFLSFVLTFMFNIFKLFHLNQL-FSWFVNSKILKFTLFMNFLSLGGLPP 252

 Frog   257 LSGFMPKWLILQELTNQNTPILATMLALSALLSLFFYLRLSYSITLTS----------SPNTSNS 311
            ..||:||||::|:||..|...:.|::.:|.|::||||||:.||..:.:          :.|:.| 
  Fly   253 FLGFLPKWLVIQQLTLCNQYFMLTLMMMSTLITLFFYLRICYSAFMMNYFENNWIMKMNMNSIN- 316

 Frog   312 PLTWRHNSKQPTTLLS---LMLISSFFLL 337
                 :|.....|..|   |.|||.|:.:
  Fly   317 -----YNMYMIMTFFSIFGLFLISLFYFM 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND2YP_203371.1 ND2 1..345 CDD:177193 143/354 (40%)
ND2YP_009047266.1 ND2 1..340 CDD:214442 143/354 (40%)

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