DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and CG10232

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_651175.4 Gene:CG10232 / 42800 FlyBaseID:FBgn0039108 Length:509 Species:Drosophila melanogaster


Alignment Length:416 Identity:111/416 - (26%)
Similarity:167/416 - (40%) Gaps:95/416 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CKVTDTMP----GICRTSSDCEPLIDGYIKSGVLTLNDVPSCGLGAWGEIFCCPTK--PCCD--- 85
            |:..:..|    .|||:...| |.:....|.....|.. ..||:..    :|||.:  |.|.   
  Fly   134 CQRQEIFPCQYDEICRSRDSC-PFLKLKRKKAQNILMS-RQCGINT----YCCPKQEFPDCPADE 192

  Fly    86 -----------NSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAACKKIRERKQQRSGNQ 139
                       ::|......:...:.:..:.:.|:|      .|:.....|.:        .||.
  Fly   193 KCIRLDKCLRIHNTTMEDGANLMDNRQCAIDTRRID------SDKRHYICCPE--------PGNV 243

  Fly   140 L---------VIHIVGGYPVDPGVYPHMAAIGY----ITFGTDFRCGGSLIASRFVLTAAHCVNT 191
            |         :..:..|....|..||.||.:.|    ::..|: .|.||||..|:||||||||..
  Fly   244 LPTSCGQAPPLYRMAYGTAARPNEYPWMAMLIYENRRLSTMTN-NCSGSLINKRYVLTAAHCVVK 307

  Fly   192 D--ANTPAF---VRLGAVNI-ENPDHSYQ--------DIVIRSVKIHPQYVGNK--YNDIAILEL 240
            |  .||...   ||||..:| .|||..:.        :|.|....:|.||....  .:|||::.|
  Fly   308 DKMVNTDLVLRRVRLGEHDITTNPDCDFTGNCAAPFVEIGIEYFNVHEQYFNTSRFESDIALVRL 372

  Fly   241 ERDVVETDNIRPACLHTDATDPPSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYA 305
            :..|..|..|.|.|:..|.. |..|....:||||.  ...|..|::||.           |..|.
  Fly   373 QTPVRYTHEILPICVPKDPI-PLHNHPLQIAGWGY--TKNREYSQVLLH-----------NTVYE 423

  Fly   306 EQ---PGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELN--VEDGMYTIMGVISSGF- 364
            .:   ...|...:.   :|.:||...: ..|:|:|||||||:..||  .:|.:| :.|::|.|. 
  Fly   424 NRYYCQDKISFFRN---ESQICASGIR-GEDSCEGDSGGPLMLTLNNDYQDIVY-LAGIVSYGSE 483

  Fly   365 GCATVTPGLYTRVSSYLDFIEGIVWP 390
            .|....||:||:..::..:|:..:.|
  Fly   484 NCGDRKPGVYTKTGAFFSWIKANLKP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829 12/52 (23%)
Tryp_SPc 143..384 CDD:214473 85/266 (32%)
Tryp_SPc 144..387 CDD:238113 86/268 (32%)
CG10232NP_651175.4 Tryp_SPc 260..506 CDD:238113 86/265 (32%)
Tryp_SPc 260..503 CDD:214473 85/262 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437412
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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