DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and CG3505

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_650380.2 Gene:CG3505 / 41777 FlyBaseID:FBgn0038250 Length:360 Species:Drosophila melanogaster


Alignment Length:416 Identity:116/416 - (27%)
Similarity:168/416 - (40%) Gaps:111/416 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SLLLGTFVLISCSSVEAAVTVGRACKVTDTMPGICRTSSDCE----PLIDGYIKSGVLTLNDVPS 66
            ||.||....:...:..|.:..||       :.|.|.:..:|:    .|:.|.:......|.....
  Fly    13 SLALGANAQLPPINCVAKIPSGR-------VTGHCISIRECDYFMRILLSGNLSQSDRNLLRDNQ 70

  Fly    67 CGLGAWGEIFCCPTKPCCDNSTITSVSTSSTTSTKAPMTSGRVDVPTFGSGDRPAVAA-CKKIRE 130
            ||:.......|||:                        |:|      .|:...|.:.: |.|:| 
  Fly    71 CGVRGNDVQVCCPS------------------------TAG------LGALTHPLLPSDCGKVR- 104

  Fly   131 RKQQRSGNQLVIHIVGGYPVDPGV--YPHMAAIGYITFGTDFR---CGGSLIASRFVLTAAHCVN 190
              .|||.:           .|..:  :|.:|.|.| |.|...:   |||.||:.|:||||||||.
  Fly   105 --WQRSND-----------TDTRIREFPWLALIEY-TRGNQEKIHACGGVLISDRYVLTAAHCVA 155

  Fly   191 TDANTP---AFVRLGAVNIE-NPD---HS----------YQDIVIRSVKIHPQYVGNK-----YN 233
            ..|.:.   ..||||..:.. |||   |.          ||||.|..:..||.|  |:     .|
  Fly   156 QAATSNLQITAVRLGEWDTSTNPDCQYHEDSKVADCAPPYQDIAIEELLPHPLY--NRTDRTQIN 218

  Fly   234 DIAILELERDVVETDNIRPACLHTD--ATDPPSNSKFFVAGWGVLNVTTRARSKILLRAG-LELV 295
            |||::.|.......|.::|.||...  ..|...:....||||       :|.|...:|.| :.:.
  Fly   219 DIALVRLASPAKLNDFVQPICLPNKQLRADELEDLVTEVAGW-------QASSSQRMRKGYVTIS 276

  Fly   296 PLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVI 360
            .:::|...||.|...|:..|       ||.:..   :..|.|::||||:  |...|| |.:.|::
  Fly   277 SIEECQRKYASQQLRIQASK-------LCGLTN---SQECYGNAGGPLM--LFKNDG-YLLGGLV 328

  Fly   361 SSG-FGCATVT-PGLYTRVSSYLDFI 384
            |.| ..|.... |.:||||:||:|:|
  Fly   329 SFGPVPCPNPDWPDVYTRVASYIDWI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829 9/52 (17%)
Tryp_SPc 143..384 CDD:214473 87/272 (32%)
Tryp_SPc 144..387 CDD:238113 88/273 (32%)
CG3505NP_650380.2 CLIP 30..82 CDD:288855 10/58 (17%)
Tryp_SPc 111..356 CDD:238113 88/267 (33%)
Tryp_SPc 111..354 CDD:214473 87/265 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437428
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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