DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and sphinx2

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_729256.2 Gene:sphinx2 / 38833 FlyBaseID:FBgn0052382 Length:253 Species:Drosophila melanogaster


Alignment Length:306 Identity:54/306 - (17%)
Similarity:100/306 - (32%) Gaps:113/306 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 AACKKIRERKQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGY-------ITFGTDFRCGGSLIASR 180
            :.|:|          |:|...|.|||...|....::..|.|       :.||     .|::|:::
  Fly    15 SVCEK----------NKLSPRITGGYRAKPYTIIYLVGIVYAKSPLSSLKFG-----AGTIISNQ 64

  Fly   181 FVLTA----------AHCVNTDANTPAFVRLGAVNIENPD---HSYQDIVIRSVKIHPQYVGNKY 232
            ::||.          ||.    .:..||.....:.|...:   |..:..:|..||...|....:.
  Fly    65 WILTVKEVLIFKYIEAHF----GSKRAFWGYDILRIYRENFYFHYDKTRIIALVKCPYQKFDRRM 125

  Fly   233 NDIAILELERDVVETDNIRPACLHTDATDPPSNSKF--------FVAGWGVLNVTTRARSKILLR 289
            :.:.:                        |...::|        .|.|||.      .:.|:.| 
  Fly   126 SRVRV------------------------PAYGARFERYVGNMTMVCGWGT------DKRKVRL- 159

  Fly   290 AGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCA------------IDQKLIADACKGDSGGP 342
                              |..:|.::..|:::..||            ...:.....|:||.||.
  Fly   160 ------------------PTWMRCVEVEVMNNTECAKYHTPLKWYEMCTSGEGFKGVCEGDMGGA 206

  Fly   343 LIHELNVEDGMYTIMGVI-SSGFGCATVTPGLYTRVSSYLDFIEGI 387
            ::    ......|.:|:| .....|:...|.::.|||.::.:|:.:
  Fly   207 VV----TMGPNPTFIGIIWLMPTNCSIGYPSVHIRVSDHIKWIKHV 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 50/283 (18%)
sphinx2NP_729256.2 Tryp_SPc 25..245 CDD:473915 49/281 (17%)
Blue background indicates that the domain is not in the aligned region.

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