DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and CG4927

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001033953.1 Gene:CG4927 / 36852 FlyBaseID:FBgn0034139 Length:362 Species:Drosophila melanogaster


Alignment Length:288 Identity:93/288 - (32%)
Similarity:139/288 - (48%) Gaps:38/288 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 KKIRERKQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGY---ITFGTDFRCGGSLIASRFVLTAAH 187
            |:.|...:.|:..:....||||.......:|.||.:|.   .:...|:.||..:|..:|||||||
  Fly    87 KECRRFNEIRTSCRTTPFIVGGAKAAGREFPFMALLGQRGKNSSQIDWDCGAIIIHPKFVLTAAH 151

  Fly   188 CVNT--------DAN--TPAF-VRLGAV--NIENPDHSYQDIVIRSVKIHPQY-----VGNKYND 234
            |:.|        |.|  .|.: ||||.:  |....|...||..:.:..:||.|     .|::.||
  Fly   152 CLETSETKEQRLDPNYDGPKYVVRLGELDYNSTTDDAQPQDFRVLNYVVHPAYGEDDDTGSRKND 216

  Fly   235 IAILELERDVVETDNIRPACLHTDATDPPSNSKFFV--AGWGVLNVTTRARSKILLRAGLELVPL 297
            ||::|||.:...::.:.||||..|.    .|.:..|  ||||..:.:..|.|.:|      .|.|
  Fly   217 IAVVELEMEATFSEYVAPACLPLDG----GNEQLQVAAAGWGATSESGHASSHLL------KVSL 271

  Fly   298 DQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGMYTIMGVISS 362
            |:.:::...|    ||..:..:.:.|||..:...||.|.||||||:..:..:...:..::|:.|.
  Fly   272 DRYDVAECSQ----RLEHKIDVRTQLCAGSRSTSADTCYGDSGGPVFVQHPIYSCLKQVIGITSY 332

  Fly   363 GFGCATV-TPGLYTRVSSYLDFIEGIVW 389
            |..|... .|.:||:|..|.|:||.|||
  Fly   333 GLVCGVQGLPSVYTKVHLYTDWIENIVW 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 87/266 (33%)
CG4927NP_001033953.1 Tryp_SPc 105..358 CDD:238113 87/266 (33%)
Blue background indicates that the domain is not in the aligned region.

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