DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and Jon25Bii

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001285608.1 Gene:Jon25Bii / 33707 FlyBaseID:FBgn0031654 Length:276 Species:Drosophila melanogaster


Alignment Length:268 Identity:70/268 - (26%)
Similarity:108/268 - (40%) Gaps:69/268 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 IVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANTP----AFVRLGA- 203
            |..|||...|..|::..:|:.:....:.||||:|...:|:|||||.:...:..    |..||.| 
  Fly    43 ITNGYPAYEGKVPYIVGLGFSSDSGGWWCGGSIIGHTWVITAAHCTHGAHSVTIYYGALWRLQAQ 107

  Fly   204 -VNIENPDHSYQDIVIRSVKIHPQY-VGNKYNDIAILELERDVVETDNIRPACLHTDATDPPSNS 266
             .:.....|..|         |..| ..|..|||::       :.|.::....|......|..|.
  Fly   108 YTHTVGSGHFRQ---------HSDYNTNNLNNDISL-------INTPHVDFWHLINKVELPDGNE 156

  Fly   267 KF--------FVAGW-------GVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQ 316
            :.        ..:||       ||.:......|:|:.|        |:|:..|....        
  Fly   157 RHDSFAGWWALASGWGRPCDSCGVSDYLNCVDSQIITR--------DECSSVYGTDV-------- 205

  Fly   317 GVIDSLLCAIDQ--KLIADACKGDSGGPLI-HELNVEDGMYTIMGVIS--SGFGCATVTPGLYTR 376
             :.|:::|....  |   ..|.|||||||: |:.:      .::||.|  :..||.:..|..:||
  Fly   206 -ITDNVICTSTPGGK---STCAGDSGGPLVLHDRS------KLVGVTSFVAASGCTSGLPDGFTR 260

  Fly   377 VSSYLDFI 384
            |:||||:|
  Fly   261 VTSYLDWI 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 143..384 CDD:214473 69/266 (26%)
Tryp_SPc 144..387 CDD:238113 70/268 (26%)
Jon25BiiNP_001285608.1 Tryp_SPc 42..268 CDD:214473 69/266 (26%)
Tryp_SPc 43..271 CDD:238113 70/268 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436969
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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