DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and Jon25Biii

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_608881.1 Gene:Jon25Biii / 33706 FlyBaseID:FBgn0031653 Length:258 Species:Drosophila melanogaster


Alignment Length:296 Identity:80/296 - (27%)
Similarity:121/296 - (40%) Gaps:88/296 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 AVAACKKIRER---KQQRSGNQLVIHIVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFV 182
            |||:.....|:   |......::...|..||....|..|:...:|   |...:.||||:||..:|
  Fly    11 AVASASAFDEKVFVKDLPKATKIEGRITNGYAAPEGKAPYTVGLG---FSGGWWCGGSIIAHDWV 72

  Fly   183 LTAAHCVNTDANTPAFVRLGAVNIENPDHSYQDIVIRSVKIHPQYVGN----KYN--DIAILELE 241
            |||.||:...|:  ..|..||....|...::.             |||    |::  |||::.:.
  Fly    73 LTAEHCIGDAAS--VIVYFGATWRTNAQFTHT-------------VGNGNFIKHSNADIALIRIP 122

  Fly   242 RDVVETDNIRPACLHTD------ATDPPS-NSKF--------FVAGWGVLNVTTRARSKI---LL 288
                          |.|      ..:.|| |.::        ...|||    .|...|.:   |.
  Fly   123 --------------HVDFWHMVNKVELPSYNDRYNNYNEWWAVACGWG----GTYDGSPLPDWLQ 169

  Fly   289 RAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLC--AIDQKLIADACKGDSGGPLIHELNVED 351
            ...|::|..::|..:|    ||:.       |:::|  .:|.|.|   |.|||||||:    ..|
  Fly   170 CVDLQIVHNEECGWTY----GSVG-------DNVICTRTVDGKSI---CGGDSGGPLV----THD 216

  Fly   352 GMYTIMGV---ISSGFGCATVTPGLYTRVSSYLDFI 384
            |. .::||   :||. ||.:..|..:.||:.:||:|
  Fly   217 GS-KLVGVSNFVSSN-GCQSGAPAGFQRVTYHLDWI 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 143..384 CDD:214473 74/269 (28%)
Tryp_SPc 144..387 CDD:238113 75/270 (28%)
Jon25BiiiNP_608881.1 Tryp_SPc 36..250 CDD:214473 74/269 (28%)
Tryp_SPc 37..253 CDD:238113 75/270 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45436981
Domainoid 1 1.000 70 1.000 Domainoid score I6224
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.030

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