DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and Hayan

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001097020.1 Gene:Hayan / 32831 FlyBaseID:FBgn0030925 Length:637 Species:Drosophila melanogaster


Alignment Length:639 Identity:238/639 - (37%)
Similarity:288/639 - (45%) Gaps:266/639 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLGTFVLISCSSVEAAVTV---GRACKVTDTMPGICRTSSDCEPLIDGYIKSGVLTLNDVPSCGL 69
            |||..||    :..|.|||   |..|:|...:||||.:||.||. |.||:|||.|:.:.|||||.
  Fly    11 LLGLLVL----TTSAYVTVGDEGDPCQVRSDIPGICLSSSACEN-IRGYLKSGTLSTSQVPSCGF 70

  Fly    70 GAWGEIFCCPTKPCC-------------------------------------------------- 84
            ||..||.||||..||                                                  
  Fly    71 GAREEIICCPTVACCATDRGREVQFHATSSERSSLPEPKREPTPEPEPLPPTTTEGKRERESRLD 135

  Fly    85 ----------------------------------------------------------------- 84
                                                                             
  Fly   136 ENQNFFDFNKLLSTTVKPQKTHESLKLPTQESMKTPTHESMKMPTHESMKLPTHEPMKLPIQSVG 200

  Fly    85 ---------------------------------------------DNST---------------- 88
                                                         :||.                
  Fly   201 AWGIAPSKTQPIASTQRSFMEPEWGREPRIVNRPLTTPRSRPQRPNNSNFNTNPSPNNNNLIHLV 265

  Fly    89 ----------------ITSVSTSSTTSTKAPMTS------------------------------- 106
                            :..|..::.|.|.||..:                               
  Fly   266 NDRLREQGMQIEPAREVPMVLQTTPTPTPAPTPTQLIDPFEPYRFRGQDRDKDTQPQEPWNDVSN 330

  Fly   107 -------------------------GRVDVPTFGSGDRPAVAACKKIRERKQQRSGNQLVIHIVG 146
                                     .||::|   ..:||:||||:|||.     .|..|.:||:.
  Fly   331 NLDADPAPSIFNPAETRPTTPNPNPSRVNLP---EKERPSVAACEKIRS-----GGKPLTVHILD 387

  Fly   147 GYPVDPGVYPHMAAIGYITFGT-DFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPD 210
            |..||.|||||||||.|.:||: .|||||||||||||||||||||:|.:||:||||||:|||||:
  Fly   388 GERVDRGVYPHMAAIAYNSFGSAAFRCGGSLIASRFVLTAAHCVNSDDSTPSFVRLGALNIENPE 452

  Fly   211 HSYQDIVIRSVKIHPQYVG-NKYNDIAILELERDVVETDNIRPACLHTDATDPPSNSKFFVAGWG 274
            ..||||.:..|:|||.|.| :||.|||||:|..|..|:|.||||||:||.:|||:|.|:||||||
  Fly   453 PGYQDINVIDVQIHPDYSGSSKYYDIAILQLAEDAKESDVIRPACLYTDRSDPPANYKYFVAGWG 517

  Fly   275 VLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDS 339
            |:|||.||.|||||||.|:|||.|:||.|:||||.:.|.|::|||.|.|||.|:....|||:|||
  Fly   518 VMNVTNRAVSKILLRAALDLVPADECNASFAEQPSANRTLRRGVIASQLCAADKNQRKDACQGDS 582

  Fly   340 GGPLIHELNVEDGMYTIMGVISSGFGCATVTPGLYTRVSSYLDFIEGIVWPDNR 393
            |||||.|::..||.|:|:|||||||||||.||||||||||:||:|||||||.||
  Fly   583 GGPLILEIDDVDGTYSIVGVISSGFGCATKTPGLYTRVSSFLDYIEGIVWPSNR 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829 27/48 (56%)
Tryp_SPc 143..384 CDD:214473 166/242 (69%)
Tryp_SPc 144..387 CDD:238113 167/244 (68%)
HayanNP_001097020.1 CLIP 32..80 CDD:197829 27/48 (56%)
Tryp_SPc 384..627 CDD:214473 166/242 (69%)
Tryp_SPc 385..630 CDD:238113 167/244 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450023
Domainoid 1 1.000 161 1.000 Domainoid score I8273
eggNOG 1 0.900 - - E33208_3BRA1
Homologene 1 1.000 - - H117627
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D105391at6960
OrthoFinder 1 1.000 - - FOG0014330
OrthoInspector 1 1.000 - - mtm9700
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
98.850

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