DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and CG31780

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_723920.1 Gene:CG31780 / 318937 FlyBaseID:FBgn0051780 Length:464 Species:Drosophila melanogaster


Alignment Length:227 Identity:59/227 - (25%)
Similarity:101/227 - (44%) Gaps:22/227 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   168 TDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPDHSYQ--DIVIRSVKIHPQY-VG 229
            :.:..||:|||...|:||.........:...||.|..:.........  |:.|||:..||.: :.
  Fly   130 SSYVAGGALIAPHVVITARQRTENMTASQLVVRAGEWDFSTKTEQLPSVDVPIRSIVRHPGFNLE 194

  Fly   230 NKYNDIAILELERDVVETDNIRPACLHTDATDPPSN---SKFFVAGWGVLNVTTRARSKILLRAG 291
            |..|::|::.|.|.:..:.:|.|.|:    ...|.|   |:....|||..:....:...:|.:..
  Fly   195 NGANNVALVFLRRSLTSSRHINPICM----PSAPKNFDFSRCIFTGWGKNSFDDPSYMNVLKKIS 255

  Fly   292 LELVPLDQCNISYAEQPGSIRLLKQG---VIDSLLCAIDQKLIADACKGDSGGPLIHELNVEDGM 353
            |.:|....|     ||  .:||....   :.:||:||..:. ..|:|:||.|.||...:......
  Fly   256 LPVVQRRTC-----EQ--QLRLYYGNDFELDNSLMCAGGEP-GKDSCEGDGGSPLACAIKDNPQR 312

  Fly   354 YTIMGVISSGFGCATV-TPGLYTRVSSYLDFI 384
            |.:.|:::.|..|... .|.:||.|::.:::|
  Fly   313 YELAGIVNFGVDCGLPGVPAVYTNVANVIEWI 344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 59/227 (26%)
CG31780NP_723920.1 Tryp_SPc 113..344 CDD:214473 58/225 (26%)
Blue background indicates that the domain is not in the aligned region.

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