DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and sphinx1

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_729255.2 Gene:sphinx1 / 318005 FlyBaseID:FBgn0052383 Length:253 Species:Drosophila melanogaster


Alignment Length:292 Identity:48/292 - (16%)
Similarity:102/292 - (34%) Gaps:105/292 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 NQLVIHIVGGYPVDPGVYPHMAAIGY-------ITFGTDFRCGGSLIASRFVLTAAHCVNTDANT 195
            |:|...|.|||........::..|.|       :.:|     .|::|:::::||....:.     
  Fly    20 NKLSPRIAGGYRAKTFTIIYLVGIVYFKSQTSSLNYG-----AGTIISNQWILTVKTVLK----- 74

  Fly   196 PAFVRLGAVNIENPDHSYQDIVIRS---------VKIHPQYVGNKYNDIAILELERDVVE----- 246
                           :||.::.:.|         ::|:.:.....|::..::.|.:...:     
  Fly    75 ---------------YSYIEVHLASRRSYRGFDIIRIYKENFRFHYDNDHVIALVKCPYQKFDRR 124

  Fly   247 TDNIRPACLHTDATDPPSNSKF--------FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNIS 303
            .|.:|.         |..:::|        .|.|:|     |..|                    
  Fly   125 MDRVRV---------PAYDTRFERYVGNMTMVCGYG-----TEKR-------------------- 155

  Fly   304 YAEQPGSIRLLKQGVIDSLLCA------------IDQKLIADACKGDSGGPLIHELNVEDGMYTI 356
            :|:.|..:|.::..|:::..||            ...:.....|:||.||.::    ......|.
  Fly   156 HAKLPEWMRCIEVEVMNNTECAKYYTPLKWYEMCTSGEGFKGVCEGDIGGAVV----TMGPNPTF 216

  Fly   357 MGVI-SSGFGCATVTPGLYTRVSSYLDFIEGI 387
            :|:| .....|:...|.::.|||.::.:|:.:
  Fly   217 IGIIWLMPENCSIGYPSVHIRVSDHIKWIKRV 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 46/284 (16%)
sphinx1NP_729255.2 Tryp_SPc 25..245 CDD:473915 45/282 (16%)
Blue background indicates that the domain is not in the aligned region.

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