DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and Gzme

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_034503.2 Gene:Gzme / 14942 MGIID:109265 Length:248 Species:Mus musculus


Alignment Length:249 Identity:73/249 - (29%)
Similarity:112/249 - (44%) Gaps:36/249 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 IVGGYPVDPGVYPHMAAIGYITF-GTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIE 207
            |:||:.|.|...|:||.:..:.. |....|||.|:...||||||||    .|....|.|||.||:
Mouse    21 IIGGHVVKPHSRPYMAFVKSVDIEGNRRYCGGFLVQDDFVLTAAHC----RNRTMTVTLGAHNIK 81

  Fly   208 NPDHSYQDIVIRSVKIHPQYVGNK-YNDIAILELERDVVETDNIRPACLHTDATDPPSNSKF--- 268
            ..:.:.|.|.:.....||.|.... ::||.:|:||.....|..:||..|      |..|::.   
Mouse    82 AKEETQQIIPVAKAIPHPDYNATAFFSDIMLLKLESKAKRTKAVRPLKL------PRPNARVKPG 140

  Fly   269 ---FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKL 330
               .|||||..::.....|..|..|.|.:...::|...:.....:..          :||.|.|.
Mouse   141 DVCSVAGWGSRSINDTKASARLREAQLVIQEDEECKKRFRHYTETTE----------ICAGDLKK 195

  Fly   331 IADACKGDSGGPLIHELNVEDGMYTIMGVISSGFGCATVTPGLYTRVSSYLDFI 384
            |....||||||||:    .::..|.::....:    .|::.|::|::..:|.:|
Mouse   196 IKTPFKGDSGGPLV----CDNKAYGLLAYAKN----RTISSGVFTKIVHFLPWI 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 73/249 (29%)
GzmeNP_034503.2 Tryp_SPc 20..241 CDD:214473 72/247 (29%)
Blue background indicates that the domain is not in the aligned region.

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