DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and CG43335

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001247121.1 Gene:CG43335 / 12798413 FlyBaseID:FBgn0263040 Length:281 Species:Drosophila melanogaster


Alignment Length:260 Identity:75/260 - (28%)
Similarity:115/260 - (44%) Gaps:40/260 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   144 IVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIEN 208
            |:||...:...:|.||   |:.....:.|.|:||.::||||||||:....|..  ||||...:..
  Fly    42 IIGGSDAEITSHPWMA---YLYNEFHYFCAGTLITNQFVLTAAHCIEASKNLT--VRLGGSGLTR 101

  Fly   209 PDHSYQDIVIRSVKIHPQYVGNKY-------NDIAILELERDVVETDNIRPACLHTDATDP---- 262
            .|.|...|......: ...:.:||       ||||::.|.|.|...|:|||.|:   ..||    
  Fly   102 SDGSMCQITAEDYSV-SMAIKHKYFTPSIMLNDIAMIRLARTVKFYDHIRPICI---ILDPAVRL 162

  Fly   263 --PSNSKFFVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCA 325
              .........|||:.:  .|....:|..|.:.::..:.|:          :|....:....:||
  Fly   163 LLEDGMTLMATGWGLAD--KRMHPHLLQEAPITVMNRNVCS----------KLYDVAITQGQICA 215

  Fly   326 IDQKLIADACKGDSGGPLIHELN-VEDGMYTIMGVISSG-FGCATVTPGLYTRVSSYLDFIEGIV 388
            .|::  .:.|.|||||||...:| ..|..:...|:.|.| ..|.  :|.:||.:|:|..:|..:|
  Fly   216 GDKE--TNTCLGDSGGPLGGVVNYYGDLRFVQYGITSFGDIECR--SPSIYTDLSTYSGWINMVV 276

  Fly   389  388
              Fly   277  276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 143..384 CDD:214473 73/254 (29%)
Tryp_SPc 144..387 CDD:238113 74/257 (29%)
CG43335NP_001247121.1 Tryp_SPc 41..272 CDD:214473 73/254 (29%)
Tryp_SPc 42..275 CDD:238113 74/257 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45437444
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24260
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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