DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and LOC1278167

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_317712.5 Gene:LOC1278167 / 1278167 VectorBaseID:AGAMI1_011617 Length:390 Species:Anopheles gambiae


Alignment Length:257 Identity:68/257 - (26%)
Similarity:113/257 - (43%) Gaps:35/257 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 PGVYPHMAAIGYIT---FGTDFRCGGSLIASRFVLTAAHCVNTD-----ANTPAFVRLGAVNIEN 208
            ||.:|...|: |.|   ....:.|||.::..|.|:||||||...     |.....||:|..::..
Mosquito    49 PGQFPWHVAL-YRTEQPLTISYACGGFIVGERVVITAAHCVTAPSGYQLAADELTVRVGLYDLLT 112

  Fly   209 PDHSYQDIVIRSVKIHPQY-VGNKYNDIAILELERDVVE-TDNIRPACLHTDATDPPSNSKFFVA 271
            .....|:..:..:..|..: .|:..:|:|:|.| |.:|| .|.::|.||..:...........|:
Mosquito   113 LARHSQEHRVGRIHRHGNFTTGSLRHDLALLML-RTIVEFGDFVQPICLPREPDALKGVRTGTVS 176

  Fly   272 GWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACK 336
            |||::...:.||:  |..|.:.:|....|..|.:...|.:      :.|.:.|| ..:...:.|.
Mosquito   177 GWGLVEDDSPART--LRSATMPVVSYLSCLQSDSTLFGPV------LYDGMFCA-GWENGTNVCN 232

  Fly   337 GDSGGPLIHELNVEDGMYTIMGVIS-----------SGFGCATVTPGLYTRVSSYLDFIEGI 387
            |||||.....:|   |.:|..|::|           :.|.|.|.:...:..:..||::||.:
Mosquito   233 GDSGGAFAANVN---GSWTAFGIVSFTGVREHTDGQTPFRCDTKSLAGFISIPMYLNWIESV 291

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 68/255 (27%)
LOC1278167XP_317712.5 None
Blue background indicates that the domain is not in the aligned region.

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