DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and LOC101886682

DIOPT Version :9

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:XP_005170582.2 Gene:LOC101886682 / 101886682 -ID:- Length:252 Species:Danio rerio


Alignment Length:252 Identity:71/252 - (28%)
Similarity:111/252 - (44%) Gaps:34/252 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 IHIVGGYPVDPGVYPHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNI 206
            :.|..|....|...|:|.:   :...:...||||||:..||||||||  .|.:....|..||.::
Zfish    25 VGIEDGTEAKPHSRPYMVS---LQINSQHICGGSLISKEFVLTAAHC--WDKDDVLTVVTGAHDL 84

  Fly   207 ENPDHSYQDIVIRSVKIHPQYVGNKY---NDIAILELERDVVETDNIRPACLHTDATDPPSNSKF 268
            .. ...|....:.|...||.|  |.|   |||.:|:|:..|..::::....|..:..|..:::..
Zfish    85 RK-KAIYNTFKVTSYIPHPDY--NSYTLENDIMLLKLKTKVRLSNSVGLISLPRNGEDLKADTLC 146

  Fly   269 FVAGWGVLNVTTRARSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIAD 333
            .:||||.| ....|::..|..|...:|...:|         ..|.....|...::||...   ..
Zfish   147 SIAGWGRL-WRKGAKTDRLREAETVIVNDAEC---------ERRWESDYVASKMICAYGH---GG 198

  Fly   334 ACKGDSGGPLIHELNVEDGMYTIMGV--ISSGFGC-ATVTPGLYTRVSSYLDFIEGI 387
            .|.|||||||:..       .|.:|:  .|..:.| :.:.|.::.|:|:||.:|:.|
Zfish   199 TCSGDSGGPLVCN-------NTAVGITAFSDRYLCKSRLFPDVFARISAYLPWIQNI 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 143..384 CDD:214473 69/246 (28%)
Tryp_SPc 144..387 CDD:238113 70/248 (28%)
LOC101886682XP_005170582.2 Tryp_SPc 27..248 CDD:238113 70/248 (28%)
Tryp_SPc 27..245 CDD:214473 69/245 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D476534at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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