DRSC/TRiP Functional Genomics Resources

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Protein Alignment psh and CG42694

DIOPT Version :10

Sequence 1:NP_573297.1 Gene:psh / 32832 FlyBaseID:FBgn0030926 Length:394 Species:Drosophila melanogaster
Sequence 2:NP_001188994.1 Gene:CG42694 / 10178792 FlyBaseID:FBgn0261584 Length:512 Species:Drosophila melanogaster


Alignment Length:247 Identity:68/247 - (27%)
Similarity:110/247 - (44%) Gaps:45/247 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 PHMAAIGYITFGTDFRCGGSLIASRFVLTAAHCVNTDANTPAFVRLGAVNIENPDHSY--QDIVI 218
            |....:.:|:.||...|.||||:.:|||:||.|:  |.:...||:||..|.....|.|  .::||
  Fly    42 PQAGWLAHISNGTHVLCSGSLISKQFVLSAAQCI--DVHGKLFVQLGVSNATKSPHWYTVSNVVI 104

  Fly   219 RSVKIHPQYVGNK-YNDIAILELERDVVETDNIRPAC--LHTDATDPPSNSKFFVAGWGVL-NVT 279
                  |.:.|.: ..||.:|:|.:.|...|.:.|.|  |:|:..|...          :| |.|
  Fly   105 ------PSHSGKRLQRDIGLLKLSQSVDYNDFVYPICIALNTNTLDMVK----------ILQNFT 153

  Fly   280 TRA---RSKILLRAGLELVPLDQCNISYAEQPGSIRLLKQGVIDSLLCAIDQKLIADACKGDSGG 341
            |.|   ::|......|..:..|:|.::          |...|....:||...:. .::|..|||.
  Fly   154 TSAWLSKNKNPQTIVLSQLSRDRCKLN----------LSGNVTPKEICAASLQR-NNSCFIDSGS 207

  Fly   342 ----PLIHELN-VEDGMYTIMGVISSGFGCATVTPGLYTRVSSYLDFIEGIV 388
                |:|...| |.:.::.|.|.::....|:  .|.:|..|:..:.:||.:|
  Fly   208 ALTQPIIQGSNIVREMLFGIRGYVNGRSWCS--EPAIYIDVAECVGWIETVV 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pshNP_573297.1 CLIP 30..79 CDD:197829
Tryp_SPc 144..387 CDD:238113 67/244 (27%)
CG42694NP_001188994.1 Tryp_SPc 46..253 CDD:473915 64/237 (27%)
Tryp_SPc 319..502 CDD:473915
Blue background indicates that the domain is not in the aligned region.

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