DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hayan and Tmprss2

DIOPT Version :10

Sequence 1:NP_001097020.1 Gene:Hayan / 32831 FlyBaseID:FBgn0030925 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_056590.2 Gene:Tmprss2 / 50528 MGIID:1354381 Length:490 Species:Mus musculus


Alignment Length:217 Identity:64/217 - (29%)
Similarity:108/217 - (49%) Gaps:16/217 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 CGGSLIASRFVLTAAHCVNSDDSTPSFVRLGALNIENPEPGYQDINVIDVQI-HPDYSGSSKYYD 477
            ||||:|...:::||||||....|:|.:....|..:......|...:.::..| ||:|...:|..|
Mouse   279 CGGSIITPEWIVTAAHCVEEPLSSPRYWTAFAGILRQSLMFYGSRHQVEKVISHPNYDSKTKNND 343

  Fly   478 IAILQLAEDAKESDVIRPACLYTDRSDPPANYKYFVAGWGVMNVTNRAVSKILLRAALDLVPADE 542
            ||:::|......:|:::|.||.........:.:.:::|||......: .|.:|..|.:.|:...:
Mouse   344 IALMKLQTPLAFNDLVKPVCLPNPGMMLDLDQECWISGWGATYEKGK-TSDVLNAAMVPLIEPSK 407

  Fly   543 CNASFAEQPSANRTLRRGVIASQLCAADKNQRKDACQGDSGGPLI-LEIDDVDGTYSIVGVISSG 606
            ||:.:        .....:..:.:||.......|:|||||||||: |:    :|.:.::|..|.|
Mouse   408 CNSKY--------IYNNLITPAMICAGFLQGSVDSCQGDSGGPLVTLK----NGIWWLIGDTSWG 460

  Fly   607 FGCA-TKTPGLYTRVSSFLDYI 627
            .||| ...||:|..|:.|.|:|
Mouse   461 SGCAKALRPGVYGNVTVFTDWI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HayanNP_001097020.1 CLIP 32..80 CDD:197829
Tryp_SPc 385..630 CDD:238113 64/217 (29%)
Tmprss2NP_056590.2 LDLa 112..147 CDD:238060
SRCR_2 152..247 CDD:464747
Tryp_SPc 254..485 CDD:238113 64/217 (29%)
Blue background indicates that the domain is not in the aligned region.

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