DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hayan and Gzma

DIOPT Version :10

Sequence 1:NP_001097020.1 Gene:Hayan / 32831 FlyBaseID:FBgn0030925 Length:637 Species:Drosophila melanogaster
Sequence 2:NP_703198.2 Gene:Gzma / 266708 RGDID:628640 Length:261 Species:Rattus norvegicus


Alignment Length:285 Identity:78/285 - (27%)
Similarity:121/285 - (42%) Gaps:69/285 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   360 LPEKERPSVAACEKIRSGGKPLTVHILDGERVDRGVYPHMAAIAYNSFGSAAFRCGGSLIASRFV 424
            :||      ..||:| .||..:..|          ..|:|..:.......    |.|:|||..:|
  Rat    21 IPE------GGCERI-IGGDTVVPH----------SRPYMVLLKLKPDSV----CAGALIAKNWV 64

  Fly   425 LTAAHCVNSDDSTPSFVRLGALNIENPEPGYQDINVIDVQIHPDYSGSSKYYDIAILQLAEDA-- 487
            ||||||:....|.   |.|||.:|:. ||..|.::|.....:|.:...:...|:.:|:|.:.|  
  Rat    65 LTAAHCIPGKKSE---VILGAHSIKK-EPEQQILSVKKAYPYPCFDKHTHEGDLQLLRLKKKATL 125

  Fly   488 ----------KESDVIRPACLYTDRSDPPANYKYFVAGWGVMNVTNRAVSKILLRAA-LDLVPAD 541
                      |:.|.::|..            :..|||||..:  |::.....||.. :.::...
  Rat   126 NKNVAILHLPKKGDDVKPGT------------RCHVAGWGRFH--NKSPPSDTLREVNITVIDRK 176

  Fly   542 ECNASFAEQPSANRTLRRGVIASQLCAADKNQRKDACQGDSGGPLILEIDDVDGTYSIVGVISSG 606
            .||    ::...|.....|:  :.:||.:....||:|.|||||||:.|     |.:.  |:.:.|
  Rat   177 ICN----DEKHYNFNPVIGL--NMICAGNLRGGKDSCYGDSGGPLLCE-----GIFR--GITAFG 228

  Fly   607 F--GCA-TKTPGLYTRVS-SFLDYI 627
            .  .|. .|.||:||.:| ..||:|
  Rat   229 LEGTCGDPKGPGIYTLLSDKHLDWI 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HayanNP_001097020.1 CLIP 32..80 CDD:197829
Tryp_SPc 385..630 CDD:238113 70/260 (27%)
GzmaNP_703198.2 Tryp_SPc 29..256 CDD:238113 74/271 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.