DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and KDM2B

DIOPT Version :9

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_011537169.1 Gene:KDM2B / 84678 HGNCID:13610 Length:1353 Species:Homo sapiens


Alignment Length:267 Identity:60/267 - (22%)
Similarity:97/267 - (36%) Gaps:105/267 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 FSNLTY----VSLRRCQ-----LNDENLVGWEFLTHLETLDLRYNDRLTGSCLMSL----PTSL- 180
            ||.|::    |.:|.|:     ..|:.|  |      ..:||.:...:|...|..:    |.|| 
Human  1077 FSYLSHQDLCVCMRVCRTWNRWCCDKRL--W------TRIDLNHCKSITPLMLSGIIRRQPVSLD 1133

  Fly   181 LSLYITGCRNLCPNQLIFL-NRIPRLRELRASDLMPGGHWHIYRDLVLACPLLVMVEIS-ICSLN 243
            ||     ..|:...||.:| ||:|.||:|    ::.|..|               :.:| :||  
Human  1134 LS-----WTNISKKQLSWLINRLPGLRDL----VLSGCSW---------------IAVSALCS-- 1172

  Fly   244 RDEYRLGELRYLQSLVIKAHSTDTIRCKVSDWMLISLLDVPFLRNLMFSDAPSGFVSANALSIIS 308
                                         |...|:..|||.::..|  .||              
Human  1173 -----------------------------SSCPLLRTLDVQWVEGL--KDA-------------- 1192

  Fly   309 RFRQLRVLKMP---NQPYRPNDLLRLRNLTFLETLDLSNSPYITNEVVIELVIGIPNLSVLIVQG 370
               |:|.|..|   |:|.:.::..:|||:..|....|.    ||:..:..::..:|.||.|.:..
Human  1193 ---QMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLD----ITDASLRLIIRHMPLLSKLHLSY 1250

  Fly   371 CPLLTNR 377
            |..:|::
Human  1251 CNHVTDQ 1257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 7/31 (23%)
leucine-rich repeat 157..179 CDD:275381 5/25 (20%)
leucine-rich repeat 180..204 CDD:275381 9/25 (36%)
leucine-rich repeat 205..231 CDD:275381 5/25 (20%)
leucine-rich repeat 232..285 CDD:275381 8/53 (15%)
leucine-rich repeat 286..326 CDD:275381 9/42 (21%)
AMN1 306..>376 CDD:187754 18/72 (25%)
leucine-rich repeat 337..362 CDD:275381 4/24 (17%)
KDM2BXP_011537169.1 JmjC 182..257 CDD:214721
cupin_like 229..335 CDD:304367
zf-CXXC <615..651 CDD:251032
PHD_KDM2B 661..722 CDD:277114
F-box-like 1071..1111 CDD:289689 10/41 (24%)
leucine-rich repeat 1105..1129 CDD:275381 5/29 (17%)
AMN1 1121..1310 CDD:187754 48/215 (22%)
leucine-rich repeat 1130..1153 CDD:275381 10/27 (37%)
leucine-rich repeat 1154..1177 CDD:275381 9/72 (13%)
leucine-rich repeat 1178..1217 CDD:275381 13/57 (23%)
leucine-rich repeat 1218..1242 CDD:275381 4/27 (15%)
leucine-rich repeat 1243..1272 CDD:275381 5/15 (33%)
leucine-rich repeat 1273..1297 CDD:275381
leucine-rich repeat 1298..1323 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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