DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and AFB5

DIOPT Version :9

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_568718.1 Gene:AFB5 / 835062 AraportID:AT5G49980 Length:619 Species:Arabidopsis thaliana


Alignment Length:364 Identity:83/364 - (22%)
Similarity:131/364 - (35%) Gaps:113/364 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 LKSRISFAASCDMFENIYVRS---SPLRLSRVVNLEEMIEFSLLETKLFVELSGSDIEIIRGGPH 86
            :::.|:|.|    .|.:..||   ..|||:|.|:|              |||.    .::.|.|.
plant   239 VEAPINFKA----LEGLVARSPFLKKLRLNRFVSL--------------VELH----RLLLGAPQ 281

  Fly    87 -----TPMFSHFE--------DFIRLMSIRLTKVNEIALEGFQLTQYKWFNAPETSFSNLTYVSL 138
                 |..|||.|        |:  ..:.|..| :.:.|.||:....::..|.....:|||.::.
plant   282 LTSLGTGSFSHDEEPQSEQEPDY--AAAFRACK-SVVCLSGFRELMPEYLPAIFPVCANLTSLNF 343

  Fly   139 RRCQLNDENL-----------VGWEFLTHLETLDLRYNDRL---TGSC--LMSL----------- 176
            ....::.:..           |.|       .||...::.|   ..:|  |..|           
plant   344 SYANISPDMFKPIILNCHKLQVFW-------ALDSICDEGLQAVAATCKELRELRIFPFDPREDS 401

  Fly   177 --PTSLLSLYI--TGCRNLCPNQLIFLNRIPRLRELRASDLMP----------GGHW--HI---- 221
              |.|.|.|..  .|||.| .:.|.|..|:.....:..|:..|          |.|.  |:    
plant   402 EGPVSELGLQAISEGCRKL-ESILYFCQRMTNAAVIAMSENCPELTVFRLCIMGRHRPDHVTGKP 465

  Fly   222 ----YRDLVLACPLLVMVEISICSLNRDE-YR-LGELRYLQSLVIKAHSTDTIRCKVSDWMLISL 280
                :..:|..|..|..:.:|  .|..|: :| :||...|...:..|.:.|      ||..|..:
plant   466 MDEGFGAIVKNCKKLTRLAVS--GLLTDQAFRYMGEYGKLVRTLSVAFAGD------SDMALRHV 522

  Fly   281 LD-VPFLRNLMFSDAPSGFVSANALSIISRFRQLRVLKM 318
            |: .|.|:.|...|:|.|.|:..  |.:.|:..:|.:.|
plant   523 LEGCPRLQKLEIRDSPFGDVALR--SGMHRYYNMRFVWM 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 4/33 (12%)
leucine-rich repeat 157..179 CDD:275381 7/39 (18%)
leucine-rich repeat 180..204 CDD:275381 9/25 (36%)
leucine-rich repeat 205..231 CDD:275381 7/45 (16%)
leucine-rich repeat 232..285 CDD:275381 14/55 (25%)
leucine-rich repeat 286..326 CDD:275381 10/33 (30%)
AMN1 306..>376 CDD:187754 3/13 (23%)
leucine-rich repeat 337..362 CDD:275381
AFB5NP_568718.1 leucine-rich repeat 152..172 CDD:275381
AMN1 <162..283 CDD:187754 17/65 (26%)
leucine-rich repeat 177..202 CDD:275381
leucine-rich repeat 203..257 CDD:275381 6/21 (29%)
leucine-rich repeat 258..281 CDD:275381 10/40 (25%)
leucine-rich repeat 282..333 CDD:275381 12/53 (23%)
leucine-rich repeat 338..362 CDD:275381 2/23 (9%)
leucine-rich repeat 363..386 CDD:275381 6/29 (21%)
AMN1 <384..538 CDD:187754 39/162 (24%)
leucine-rich repeat 387..419 CDD:275381 8/31 (26%)
leucine-rich repeat 420..444 CDD:275381 5/24 (21%)
leucine-rich repeat 445..479 CDD:275381 5/33 (15%)
leucine-rich repeat 480..503 CDD:275381 7/24 (29%)
leucine-rich repeat 504..528 CDD:275381 6/29 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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