DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and fbxl9

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_001339819.4 Gene:fbxl9 / 799466 ZFINID:ZDB-GENE-030131-7165 Length:644 Species:Danio rerio


Alignment Length:372 Identity:92/372 - (24%)
Similarity:140/372 - (37%) Gaps:99/372 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LSGSDIE---IIRGGPH---------TPMFSHFEDFIRLMSIRLTKVNEIALEGFQ--------L 117
            |.||.:.   ::..|.|         .|..|..|..:..:..|||.:.::.|:|..        |
Zfish    76 LDGSSVSRQVLLEVGLHLGPRLDSLALPGSSITESCLLELLPRLTSLRKLDLQGLDSLFMSGAFL 140

  Fly   118 TQ-------YK-WFNAPETSFSNLTYVS-------------LRRCQLNDENLVGWEFLTHLETLD 161
            ::       |: ..|..|.:.|||.|:|             |||..|:..: :.:||        
Zfish   141 SREEHRRKVYRALLNLEELNLSNLRYLSDLSFNRLTICTPGLRRLSLSGCH-ISFEF-------- 196

  Fly   162 LRYNDRLTG-------SCLMSLPTSL------------LSLYITGCRNLCPNQLIFLNRIPRLRE 207
                |...|       |.|:||...|            |.|..||   :.|..   |..|.:||.
Zfish   197 ----DPYRGCPVGSGSSALVSLRNLLNLLQKQTSTLRSLDLSRTG---ITPKS---LRSISKLRG 251

  Fly   208 LRASDLMPGGHWHIYRDLV-----LACPL---LVMVEISICSLNRDEYRLGELRYLQSLVIKAHS 264
            ||..:|    :.|..::|.     :.|..   |.|:::|.|........|.....|:.|.:.:.|
Zfish   252 LRLEEL----NLHGCKELTDYSIEILCKYQSGLRMLDLSGCMELSCRAVLAVGAELKELRVLSFS 312

  Fly   265 TDTIRCKVSDWMLISLLDVPFLRNLMFSDA--PSGFVSANALSIISRFRQLRVLKMPNQPY-RPN 326
            .|   .|::|..|..|:.:|.||:|..|:.  .||......||......|:..|.:.|..| |.:
Zfish   313 QD---WKITDKGLAELMMLPHLRSLDLSECLHVSGTELVKGLSGPEPRAQVETLSLRNCTYIRDS 374

  Fly   327 DLLRLRNL--TFLETLDLSNSPYITNEVVIELVIGIPNLSVLIVQGC 371
            .:..|..|  ..|..||||:..|:|:..|..:...:|.|.||.:..|
Zfish   375 VVFSLAQLLGVHLRELDLSSCVYLTDLSVRAIATFLPALLVLRLGWC 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 9/35 (26%)
leucine-rich repeat 157..179 CDD:275381 6/28 (21%)
leucine-rich repeat 180..204 CDD:275381 8/35 (23%)
leucine-rich repeat 205..231 CDD:275381 8/30 (27%)
leucine-rich repeat 232..285 CDD:275381 13/52 (25%)
leucine-rich repeat 286..326 CDD:275381 13/42 (31%)
AMN1 306..>376 CDD:187754 20/69 (29%)
leucine-rich repeat 337..362 CDD:275381 8/24 (33%)
fbxl9XP_001339819.4 F-box_SF 5..37 CDD:459239
leucine-rich repeat 71..96 CDD:275381 5/19 (26%)
RNA1 <91..334 CDD:444072 62/268 (23%)
leucine-rich repeat 97..121 CDD:275381 5/23 (22%)
leucine-rich repeat 122..179 CDD:275381 11/56 (20%)
leucine-rich repeat 182..227 CDD:275381 13/57 (23%)
AMN1 215..427 CDD:187754 58/220 (26%)
leucine-rich repeat 228..253 CDD:275381 9/30 (30%)
leucine-rich repeat 254..277 CDD:275381 4/26 (15%)
leucine-rich repeat 280..305 CDD:275381 6/24 (25%)
leucine-rich repeat 306..325 CDD:275381 6/21 (29%)
leucine-rich repeat 331..359 CDD:275381 8/27 (30%)
leucine-rich repeat 360..386 CDD:275381 6/25 (24%)
leucine-rich repeat 387..412 CDD:275381 8/24 (33%)
leucine-rich repeat 413..497 CDD:275381 4/9 (44%)
AMN1 <498..613 CDD:187754
leucine-rich repeat 498..522 CDD:275381
leucine-rich repeat 523..548 CDD:275381
leucine-rich repeat 549..574 CDD:275381
leucine-rich repeat 575..598 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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