DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and CG5003

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_651593.1 Gene:CG5003 / 43344 FlyBaseID:FBgn0039554 Length:713 Species:Drosophila melanogaster


Alignment Length:323 Identity:72/323 - (22%)
Similarity:120/323 - (37%) Gaps:87/323 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KQLDLKSRISFAASCD--MFENIYVRSSPLRLSRVVNLEEMIEFSLLETKLF--VELSGSD---- 77
            :.||.::..:....||  :|| |:.......:..|::.....|..||:.:.:  ::||...    
  Fly    59 ESLDRETECNLMDFCDELLFE-IFQYLDTSSILAVMHCSPRFENLLLDHRFYHHIDLSNGPLPMG 122

  Fly    78 -IEIIRG------------GPHTPMFSH----FEDFIRLMSI---RLTKVNEIALEGFQLTQYKW 122
             :|.|.|            ||  |...|    |..|.:.:|.   |:.::..:.|||..| .:::
  Fly   123 ILEEILGRATEKTHTIKICGP--PSSQHVAGEFRQFTQTLSSVFPRVVQLKVLELEGVSL-DFEY 184

  Fly   123 FNAPETSFSNLTYVSLRRCQLNDENL-VG-------WEFLTHLETL-DLRYNDR-------LTGS 171
            .:..|..      .:|||.:|.|.:: ||       :....||..| ||...|.       :.| 
  Fly   185 IHITEFP------ATLRRLKLKDCSVRVGDTPKSIFYSIELHLLDLEDLSIEDNSWFEPYYIMG- 242

  Fly   172 CLMSLPTSLLSLYITGCRNLC---------------PNQLIFLNRIPRLRELRASDLMPGGHWHI 221
             |..|| ||..|.:.||:.||               ..:.:.|.:.|    :..|||........
  Fly   243 -LSKLP-SLRRLSLKGCQALCKFVPYGSMAARFGFQKLESLDLRQTP----INNSDLQCFSAIEN 301

  Fly   222 YRDLVLACPLLVMVEISICSLNRDEYRLGELRYLQSLVIKAHSTD---TIR--------CKVS 273
            .::|:|..|.::..:.::...|.:.....|....|...:|..|.|   |.|        |||:
  Fly   302 LKELLLESPQILHSKQAVAKKNTNGNATDEAASPQPDSLKVLSDDEPSTSRAAMEHLRACKVA 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 7/30 (23%)
leucine-rich repeat 157..179 CDD:275381 9/29 (31%)
leucine-rich repeat 180..204 CDD:275381 7/38 (18%)
leucine-rich repeat 205..231 CDD:275381 5/25 (20%)
leucine-rich repeat 232..285 CDD:275381 11/53 (21%)
leucine-rich repeat 286..326 CDD:275381
AMN1 306..>376 CDD:187754
leucine-rich repeat 337..362 CDD:275381
CG5003NP_651593.1 F-box 69..111 CDD:425796 9/42 (21%)
leucine-rich repeat 610..635 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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