DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and fbxl3a

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001005773.3 Gene:fbxl3a / 378451 ZFINID:ZDB-GENE-030912-5 Length:431 Species:Danio rerio


Alignment Length:215 Identity:44/215 - (20%)
Similarity:73/215 - (33%) Gaps:71/215 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 CPNQLIFLNRIPRLRELRASDLMPGGHW---------HIYRDLVLACPLLVMVEIS-ICSLNRDE 246
            |..|.:...| |:.......||.  .:|         ||::.|    |||.....| :|......
Zfish    16 CEGQTVSYKR-PKQPSEDFGDLQ--SNWVRLPQEILLHIFQYL----PLLDRAFASQVCHNWNHA 73

  Fly   247 YRLGEL-------------RYLQSL-------VIKAHS------------------------TDT 267
            :.:.||             .||::.       :||.||                        :..
Zfish    74 FHMPELWRCFEFELNQPATSYLKATHPDLIKQIIKRHSNHLQYVSFKVDSSTESAETACDILSQL 138

  Fly   268 IRCKVSDWMLISLLDVPFLRNLMFSDAP-SGFVSANALSIISRFRQLRVLKMPNQPYRPNDL--L 329
            :.|.:....|||.....|:      :.| |.|:||..:..::. :.|..||:.:.|.....|  |
Zfish   139 VNCSLKTLGLISTARPSFM------ELPKSHFISALTVVFVNS-KSLSSLKIDDTPVDDPSLKVL 196

  Fly   330 RLRNLTFLETLDLSNSPYIT 349
            ...|...|:.|.:|:.|:::
Zfish   197 VANNSDTLKLLKMSSCPHVS 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381
leucine-rich repeat 157..179 CDD:275381
leucine-rich repeat 180..204 CDD:275381 3/11 (27%)
leucine-rich repeat 205..231 CDD:275381 6/34 (18%)
leucine-rich repeat 232..285 CDD:275381 15/97 (15%)
leucine-rich repeat 286..326 CDD:275381 9/40 (23%)
AMN1 306..>376 CDD:187754 11/46 (24%)
leucine-rich repeat 337..362 CDD:275381 4/13 (31%)
fbxl3aNP_001005773.3 F-box_SF 39..80 CDD:459239 10/44 (23%)
FBXL3_LRR 83..431 CDD:467832 27/141 (19%)
leucine-rich repeat 178..203 CDD:275381 7/24 (29%)
leucine-rich repeat 204..229 CDD:275381 4/13 (31%)
leucine-rich repeat 230..255 CDD:275381
leucine-rich repeat 256..291 CDD:275381
leucine-rich repeat 292..336 CDD:275381
leucine-rich repeat 337..363 CDD:275381
leucine-rich repeat 364..389 CDD:275381
Blue background indicates that the domain is not in the aligned region.

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