DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15056 and Fbxl7

DIOPT Version :10

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001102015.1 Gene:Fbxl7 / 361907 RGDID:1305813 Length:491 Species:Rattus norvegicus


Alignment Length:291 Identity:69/291 - (23%)
Similarity:111/291 - (38%) Gaps:86/291 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 LETLDLRYNDRLTGSCLMSLPTSLLSLYITGCRNLCPNQLIFLNR-IPRLRELRASDLMPGGHWH 220
            |:.|..|........|||     |.::.::|||.|....|..:.: .|.||.|..|     |.::
  Rat   170 LKVLTRRLCQDTPNVCLM-----LETVIVSGCRRLTDRGLYTIAQCCPELRRLEVS-----GCYN 224

  Fly   221 IYR----DLVLACPLLVMVEISIC------SLNRD-EYRLGEL-------RYLQSL--------- 258
            |..    |:|..||.|..:::|.|      ||.|: ..:|..|       |||...         
  Rat   225 ISNEAVFDVVSLCPNLEHLDVSGCSKVTCISLTREASIKLSPLHGKQISIRYLDMTDCFVLEDEG 289

  Fly   259 --VIKAHSTDTI-----RC-KVSD----WMLISLLDVPFLRNLMFSDAPSGFVSANALSIISRFR 311
              .|.||.|...     || :::|    :::|....:   :.|..||.  .|||...|..|::..
  Rat   290 LHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYCTSI---KELSVSDC--RFVSDFGLREIAKLE 349

  Fly   312 -QLRVLKMPNQPYRPNDL-----------LR------------------LRNLTFLETLDLSNSP 346
             :||.|.:.:.. |..|:           ||                  .:|.|.|::||:...|
  Rat   350 SRLRYLSIAHCG-RITDVGIRYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCP 413

  Fly   347 YITNEVVIELVIGIPNLSVLIVQGCPLLTNR 377
            .:::..:..|.:...||..|.::.|..:|.:
  Rat   414 LVSDTGLESLALNCFNLKRLSLKSCESITGQ 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381
leucine-rich repeat 157..179 CDD:275381 6/21 (29%)
leucine-rich repeat 180..204 CDD:275381 6/24 (25%)
leucine-rich repeat 205..231 CDD:275381 9/29 (31%)
leucine-rich repeat 232..285 CDD:275381 19/87 (22%)
leucine-rich repeat 286..326 CDD:275381 12/40 (30%)
AMN1 306..>376 CDD:187754 19/99 (19%)
leucine-rich repeat 337..362 CDD:275381 5/24 (21%)
Fbxl7NP_001102015.1 F-box_FBXL7 114..157 CDD:438892
leucine-rich repeat 129..151 CDD:275381
leucine-rich repeat 154..187 CDD:275381 4/16 (25%)
AMN1 <185..366 CDD:187754 51/196 (26%)
leucine-rich repeat 188..213 CDD:275381 6/24 (25%)
leucine-rich repeat 214..234 CDD:275381 7/24 (29%)
leucine-rich repeat 240..273 CDD:275381 8/32 (25%)
leucine-rich repeat 274..299 CDD:275381 6/24 (25%)
AMN1 297..464 CDD:187754 32/154 (21%)
leucine-rich repeat 300..325 CDD:275381 4/24 (17%)
leucine-rich repeat 326..351 CDD:275381 8/29 (28%)
leucine-rich repeat 352..377 CDD:275381 5/25 (20%)
leucine-rich repeat 378..403 CDD:275381 3/24 (13%)
leucine-rich repeat 404..429 CDD:275381 5/24 (21%)
leucine-rich repeat 430..453 CDD:275381 4/15 (27%)
leucine-rich repeat 456..480 CDD:275381
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.