DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15056 and fbxl14b

DIOPT Version :9

Sequence 1:NP_573291.1 Gene:CG15056 / 32824 FlyBaseID:FBgn0030918 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001015043.1 Gene:fbxl14b / 324835 ZFINID:ZDB-GENE-030131-3556 Length:400 Species:Danio rerio


Alignment Length:340 Identity:78/340 - (22%)
Similarity:125/340 - (36%) Gaps:98/340 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 RVVNL---EEMIEFSL------LETKLFVELSG------SDIEIIRGGPHTPMFSHFEDFIRLMS 101
            ||:||   :::.:.||      |:....:||.|      :.:.:|..|.|           ||.|
Zfish   120 RVLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLH-----------RLKS 173

  Fly   102 IRLTKVNEIALEGFQLTQYKWFNAPETSFSNLTYVSLRRCQ-LNDENL----VGWEFLTHLETLD 161
            :.|.....::..|.........:|.|...| |.|::|:.|| |.|.:|    .|   ||.|:.|:
Zfish   174 LNLRSCRHVSDVGIGHLAGMTRSAAEGCLS-LEYLTLQDCQKLTDLSLKHISKG---LTKLKVLN 234

  Fly   162 LRYNDRLT--GSCLMSLPTSLLSLYITGCRNLCPNQLIFLNRIPRLRELRASDLMPGGHWHIYRD 224
            |.:...::  |...:|..|||.||.:..|.|:....::.|    .:..||.|.|           
Zfish   235 LSFCGGISDAGMIHLSHMTSLWSLNLRSCDNISDTGIMHL----AMGTLRLSGL----------- 284

  Fly   225 LVLACPLLVMVEISICSLNRDEYRLGELRYLQSLVIKAHSTDTIRCKVSDWMLISLLDVPFLRNL 289
                       ::|.|....|:    .|.|:...:.:..|.....|.:||               
Zfish   285 -----------DVSFCDKIGDQ----SLAYIAQGLYQLKSLSLCSCHISD--------------- 319

  Fly   290 MFSDAPSGFVSANALSIISRFRQLRVLKMPNQPYRPNDL---LRLRNLTFLETLDLSNSPYITNE 351
               |..:        .::.:..:||.|.: .|..|..|.   |...:||.|..:||.....||..
Zfish   320 ---DGIN--------RMVRQMHELRTLNI-GQCVRITDKGLELIADHLTQLTGIDLYGCTKITKR 372

  Fly   352 VVIELVIGIPNLSVL 366
             .:|.:..:|.|.||
Zfish   373 -GLERITQLPCLKVL 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15056NP_573291.1 leucine-rich repeat 133..156 CDD:275381 10/27 (37%)
leucine-rich repeat 157..179 CDD:275381 5/23 (22%)
leucine-rich repeat 180..204 CDD:275381 6/23 (26%)
leucine-rich repeat 205..231 CDD:275381 4/25 (16%)
leucine-rich repeat 232..285 CDD:275381 9/52 (17%)
leucine-rich repeat 286..326 CDD:275381 6/39 (15%)
AMN1 306..>376 CDD:187754 19/64 (30%)
leucine-rich repeat 337..362 CDD:275381 6/24 (25%)
fbxl14bNP_001015043.1 F-box-like 5..46 CDD:403981
AMN1 90..296 CDD:187754 52/220 (24%)
leucine-rich repeat 92..118 CDD:275381
leucine-rich repeat 119..144 CDD:275381 7/23 (30%)
leucine-rich repeat 145..170 CDD:275381 6/35 (17%)
leucine-rich repeat 171..203 CDD:275381 6/31 (19%)
leucine-rich repeat 204..229 CDD:275381 10/27 (37%)
AMN1 230..388 CDD:187754 46/215 (21%)
leucine-rich repeat 230..254 CDD:275381 5/23 (22%)
leucine-rich repeat 255..280 CDD:275381 6/28 (21%)
leucine-rich repeat 281..304 CDD:275381 7/48 (15%)
leucine-rich repeat 307..331 CDD:275381 5/49 (10%)
leucine-rich repeat 332..357 CDD:275381 8/25 (32%)
leucine-rich repeat 358..382 CDD:275381 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1282076at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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